Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0150 ATGTTCAATAAACTTCTGTACTTGAAATGTGTCACTTCCACAGCAACATCACCTTACCCTTTTATCCACCACTACCCATTCCTCTTTTCTCTTTGTTTCTGCACAGCCACTTCAAATTCACGCTCATTTGCAATATCCTACCTCGTTGACAACTTTGGATTCTCTCCTGAATCTGCTTCCAAAACATCTAAGTCCTACAATATTTGTTTCCAGACCTCAGAAAAGCCCGAGACTGTGATCGGGTTCTTCAGAAATCACGGTTTCTCTAATATTCAAGTAAACTATATGGTTAGAAAGGCACCGTGGTTGCTTTCTTGTGACCCCTGCAAAAGGTTATTGCCAAAGTTTGAATTTTTTCTCTCAAAGGGTGTTTCTAGGTCTGAAATTGTTGACCTAATAAGTAAGTACCCTAGAGTACTGCGTCCAAGCCTGGAGAATCATATAGTCCCAACCTATGAATTGATATATAAGTTATTCCAATCTCATGTGAGGACTACTCGTTTTATGTTTGGTAATACATTTTACTCTTTCAAGGATCGTCTGGCACACAACATCAGATTGCTGCTAGAGAATGAAGTGAGCGAATCAAATATTGCAAGATTGCTTGGGAACCATAGTAAGGCGGTCTATACCTCAAATGATATAGTTAAGTTGGTGAAGGAAGTAAAGGATTTGGGGTTTGATCCTTCAAAAGAAAGTTTTGTTGTAGCGATGATGGCCATAAAAAAAATAAGTGTTTCCCTGTGGAAGGAGAAAGTTGATACCTTCAAGAAATGGGGTTGGTCTGATGAAGCGTTGTCTGAAGCATTTAGGAGGCACCCTCACTTTATGTTGAAATCTATTAAAAAAATAAATGCTGTGATGAACCTTTGGGTCAATGAGTTGGGAAGGGATCCTTTGGAACTTGTCCATCGTCCAATGATTTTCGATTTGAGTATGGAAAAGACAATCATTCCAAGGGCCCGTGTTGTCCAGCATTTACTTTCTAAAGGCTTGAGGAAAAGTGCCAACTTTGTGTATCCGATTAGTATTCCTGAAAAGTTATTTCTTGCAAGGTTTGTGACATGTTTTAAGGAGGAATCATCTCAACTATTAAAGCTGTATCAGGAAAAAGTTAGTGTTCAAGGA 1128 0.3883 MFNKLLYLKCVTSTATSPYPFIHHYPFLFSLCFCTATSNSRSFAISYLVDNFGFSPESASKTSKSYNICFQTSEKPETVIGFFRNHGFSNIQVNYMVRKAPWLLSCDPCKRLLPKFEFFLSKGVSRSEIVDLISKYPRVLRPSLENHIVPTYELIYKLFQSHVRTTRFMFGNTFYSFKDRLAHNIRLLLENEVSESNIARLLGNHSKAVYTSNDIVKLVKEVKDLGFDPSKESFVVAMMAIKKISVSLWKEKVDTFKKWGWSDEALSEAFRRHPHFMLKSIKKINAVMNLWVNELGRDPLELVHRPMIFDLSMEKTIIPRARVVQHLLSKGLRKSANFVYPISIPEKLFLARFVTCFKEESSQLLKLYQEKVSVQG 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0150 376 Gene3D Transcription termination factor 3, mitochondrial 163 367 IPR038538 -
Vra5g0150 376 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 14 373 - -
Vra5g0150 376 PANTHER CGI-12 PROTEIN-RELATED 14 373 IPR003690 GO:0003690|GO:0006355
Vra5g0150 376 Pfam mTERF 250 335 IPR003690 GO:0003690|GO:0006355
Vra5g0150 376 Pfam mTERF 81 239 IPR003690 GO:0003690|GO:0006355
Vra5g0150 376 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Vra5g0150 376 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Vra5g0150 376 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Vra5g0150 376 SMART mt_12 232 262 IPR003690 GO:0003690|GO:0006355
Vra5g0150 376 SMART mt_12 299 333 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0150 Vra-Chr5 1189600 1190819 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vra5g0150 mTERF 4.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0150 K15032 - gmx:102663414 474.937