Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0134 ATGAATTTGGTGGAGGAGAAGAGGAAGCAGCGAGAATTTGCATTAGTGTCGGTGTCTGAGGTTTCTTCTTCTTCTTCATCTGCTTCGCCGGGTGTTGCTGTGTTCGCTGGTGACCGTCTTCAAATTCGGAATCAATCTAACCGTATTATTCTCAGTGCTCATCTCACAGATGTTCAGCCATTCAGATTAGGTCCTACTGAATCCGTTTGCATGGTGGAAGGGTCTGATGCGGACAAACAGACATCGTATTCCAGTGGAGTCGCTATACAGTTTAGAAATGAGGAAGATAGTGAGGCCTTCCATTGTGTATTCCAACAATGGAAGAAGGAATTCAATGTTCAAGGAGGAAATTTACCAAATGGAACTAATGAAATAACTTCTAAAAGCAAGTTTGATGAAAAGATAGAGTCATCTTCTGCAAAAATGTATTTTCATTATTATGGACAACTTCTGCATCAACAAAATATGTTGCAGGACTATGTGAGGACAGGAACCTATTATGCTGCAGTTATTGAGAATCGTTCAGATTTCATGGGCCGTGTAGTAGTTGATGTTGGTGCTGGTAGTGGAATTTTGTCATTATTTGCAGCCCAGGCAGGTGCAAAACATGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCACGGAAACTTATAGCTGGGAACCCAATACTTGGCCAACGAATTACAGTTATTAAAGGCAAAGTTGAGGATGTTGAACTGCCTGAGAGAGCTGATATTCTGATCTCTGAGCCCATGGGCACCTTGTTAGTCAATGAAAGAATGCTCGAGTCTTATGTCATTGCAAGGGATAGGTTTCTCACCCCTAATGGGAAAATGTTTCCTAGTGTAGGAAGGATTCACATGGCTCCTTTTAGTGATGAATATTTGTTCGTTGAAATTGCTAATAAGGCACTGTTTTGGCAGCAACAAAACTATTATGGTGTTGATTTGACGCCCTTACATGGTACTGCCTTTCAAGGATACTTTTCTCAGCCTGTGGTCGATGCTTTTGATCCAAGGTTGTTAATAGCTGCTCCTATGTTCCATGTGATAGACTTTACCAAAATAAAGGAAGAGGAGCTATATGAAATTGACATTCCTCTTAGATTCATAGCCACTGTGGGTGCCAGGCTACATGGGTTGGCATGTTGGTTTGATGTACTGTTCAATGGAAGTACTGCTCGAAGGTGGCTTACCACTGCCCCTGGTTCACCTACGACCCACTGGTATCAGTTACGCTGTGTTCTCTCACAGCCAATATATGTTGTGGCAGGGCAAGAAATCACTGGCAGGATGCACTTGATTGCCCACACTGCTCAGAGTTATACAATCTATTTAACATTGTCAGCTAAAACATGGGGCCCTGGTGCTGAACAAGGAGGGATTCTTCAAACATCGTCCTGTAAACTTGATCTGAAAGAACCTTACTATAGAATGTCTCAACCGCAAGCTTATCCATTAAACCAAGATCAACAACCTCAAGTACTTCTACCGACACAGGATATAAACATCCAATCTCAAGATTTGGATGAGTTGGAGATGATGCAGCAGCCTTCGCCCAAGTCATGTGCTCAAATTGACTCCCTCATGCAGAATGCATAA 1608 0.4235 MNLVEEKRKQREFALVSVSEVSSSSSSASPGVAVFAGDRLQIRNQSNRIILSAHLTDVQPFRLGPTESVCMVEGSDADKQTSYSSGVAIQFRNEEDSEAFHCVFQQWKKEFNVQGGNLPNGTNEITSKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRSDFMGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPILGQRITVIKGKVEDVELPERADILISEPMGTLLVNERMLESYVIARDRFLTPNGKMFPSVGRIHMAPFSDEYLFVEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAAPMFHVIDFTKIKEEELYEIDIPLRFIATVGARLHGLACWFDVLFNGSTARRWLTTAPGSPTTHWYQLRCVLSQPIYVVAGQEITGRMHLIAHTAQSYTIYLTLSAKTWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYPLNQDQQPQVLLPTQDINIQSQDLDELEMMQQPSPKSCAQIDSLMQNA* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0134 535 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 6 491 IPR025799 GO:0016274|GO:0018216
Vra5g0134 535 CDD AdoMet_MTases 182 282 - -
Vra5g0134 535 Pfam Ribosomal protein L11 methyltransferase (PrmA) 179 251 - -
Vra5g0134 535 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 146 457 IPR029063 -
Vra5g0134 535 Gene3D Vaccinia Virus protein VP39 121 283 IPR029063 -
Vra5g0134 535 Gene3D - 285 492 - -
Vra5g0134 535 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 136 451 IPR025799 GO:0016274|GO:0018216
Vra5g0134 535 PANTHER HISTONE-ARGININE METHYLTRANSFERASE 1.4-RELATED 6 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0134 Vra-Chr5 1118114 1125311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0134 143 432 C2H2 Transcription Factor Family AT3G12270 33.333 2.25e-39 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0134 K05931 - gmx:100818828 982.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0134 5 1118114 1125311 Vra5g0134 5 1118114 1125311 ECH
Vra7g2846 7 48598016 48604088 Vra5g0134 5 1118114 1125311 PCT