Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra5g0107 | ATGGCCACGGAGCAGTTGATGTCCAGTGGCGGTCCTCGCTACGTTCAGATGAAATCCTCGCCACCGCCGTCTCCGCCGGCTGCGACTGCCGAGGAGATGTCGTCGGTTCCGTCGTTCCGGCACAGCGGCGCCGAGGCCAATCGGATTTTCGAGGAATTGCCGAAAGCCTCCATCGTCTCCGTGTCTCGCCCCGACGCCAGCGATATCAGCCCCATGCAACTCTCTTACACCATTCAGGTTCAGTACAGACAGTTCAAGTGGGAGTTAATGAAGAAAGCTCATCAAGTATTTATTTTGCATTTCGCATTAAAAAAACGTGCCTTCATTGAGGAAATCCATGAGAAGCAGGAACAGGTTAAAGAATGGCTTCAAAATCTAGGAATTGGAGAACACAATGCTATGGAGCAAGATGACGATGAAGGTGATGATGAAACAATCCCATTGCATACTGATGAAACTCATGAAAGTGCTAGGGACAGAGATGTTCCATCAAGTGCTGCTCTACCAATTATACGACCAGCCTTGGGAAGACAGCAGTCTATTGCAGAGAGGGCAAAGAGAGCAATGCAAGGATATTTGAATCACTTTTTGGGAAATATCAGTATTGTGAACTCTCATGAGGTTTGCAAGTTTTTGGAGGTATCAAAGTTGTCTTTTTCACCTGAATATGGCCCCAAGCTAAAGGAAGAATATGTGATGGTGAAACATTTGCCCAAAATCCTGAAGGATGATGACTCCAGAAAGTGTTGTTTGTCTGACTGTTTCAGTTGCTGTAATGACAACTGGCAAAAGGTATGGGCTGTACTGAAACCTGGATTTTTGGCATTGCTGGCAGATCCTTTTGATACACAGCCTCTGGACATAATTGTTTTTGATGTACTGCCGGCCTCGGATGGGAATGGGGATGGTCGTTTATCACTGGCAAGTGAAATGAAGGAACGGAATCCATTACGCCATTCATTCAAGGTGGCTTGTGGAATCCGCAGTATCAGAATTAGAGTGAAAAATAGAAGTAAAGTCAAAGATTGGGTTGCTGCAATTAATGATGCTGGACTCAGGCCTCCGGAAGGTTGGTGTCATCCTCACCGTTATGGTTCCTTTGCTCCTCCAAGAGGTTTAATTGAAGATGGAAGTCAAGCCCAGTGGTTTATTGATGGGCGAGCAGCATTTGAGGCCATTGCTTCTGCAATTGAGGCTGCAAAATCAGAGATATTTATCTGTGGGTGGTGGCTGTGCCCAGAACTGTATCTACGGCGACCTTTTCACACTCATGCTTCATCAAGGCTTGATAATTTGTTGGAAGGAAAAGCTAAGCAAGGGGTTCAGATTTACATTCTTCTCTACAAAGAGGTGGCTCTTGCTCTGAAAATCAACAGTGTTTATAGCAAGAAAAAGCTTCTTGGCATTCATGAGAATGTGAGGGTATTACGCTATCCTGACCACTTTTCTACTGGTGTTTACCTGTGGTCACACCATGAAAAACTTGTCATTATTGATAACCATATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGACACATCTGAGCATAAAGTGGGAGATTTCCCTCCTCTAATCTGGCCGGGAAAAGACTATTATAACCCAAGAGAATCTGAACCAAATTCATGGGAAGATACAATGAAAGATGAATTGGATCGTGAGAAATATCCTCGTATGCCTTGGCACGATGTTCATTGTGCCCTTTGGGGACCACCTTGCCGTGACATTGCTAGGCACTTTGTTCAGCGATGGAATTATGCAAAGAGGAACAAAGCTTTATATGAGGAAGCAATACCATTACTAATGCCTCAGCATCATATGGTTATTCCACATTACTTGGGAAGAAGCCGAGAGATACAGATTCAAAGTGGGAACATAGACAATCAAACAGTTCTTAAAAGAGAAGATTCTTTTTCCTCATCTTCCCAAGACCAAGATATTCCTCTACTTTTGCCCCAGGAGTCTGATGGGTCAGATGCTCATGAAGGAGACCAAAAGTTGAATGGTGTAATCTCCTCTTCACATTGCCTGGACAAGCCAAGAAGGATCAGCACTGGTCTTCCCTTTTCATTTCGCAAGGCTAAAATTGTAGCACTTGGTTCAGACACACCAATGAAGGGCTTTGTAGATGATCTGGATTCTGAGCATGATCGTGAGAAAATGTCTCTAGATAGAGTGGCCCATTCTGACTTGCAGAATACAGATCCAGAATGGTGGGAGACGCAAGAACGGGGTGACCAGGGAGGTTTTCCTGAAGAATCAGGACAAGTTGGTCCTCTTGCTTCCTGCCGTTGCCAAGTTATTAGGAGCGTGAGTCAATGGTCTGCAGGAACAAGTCAAACTGAAGAGAGCATCCATAGTGCTTATTGTTCTCTTATTGAGAAAGCTGAATACTTCATCTACATTGAGAATCAGTTTTTTATCTCAGGTCTTTCTGGGGATGAGATGATACGGAATCGTGTGTTAGAAGCTTTATACCGACGAATTATGCGAGCTTACAATGACAAAAAAACTTTCAGGGTTATAATTGTCATACCACTGCTGCCTGGCTTCCAGGGGGGTCTTGATGATAGTGGTGCAGCATCTGTAAGAGCCATAATGCACTGGCAGTATCGAACCATTTGCAGGGGACCGAATTCTATCTTGCATAATCTTTATGAACTTCTTGGTCCTAAAATACACGACTACATCTCCTTCTATGGTCTAAGGTCTTATGGTAGACTTAATGGGGGCCCTGTGGCAACCAGCCAGGTTTATGTTCACAGTAAAATCATGATTGTTGATGATTGTATAACTTTGATTGGGTCTGCTAATATTAATGATAGGAGCTTACTTGGCTCCAGAGATTCTGAGATTGCCGTAGTTATAGAAGACAGAGAGTTGATTGGTTCTTATATGGATGGAAAACCTTGGAAAGCTGGAAAGTTTTCCTTGACCCTTCGATTGTCCTTATGGTCCGAGCACTTGGGTCTCCCTACAGGAGAGGACAATCAAATAATGGACCCAGTTGTTGAATCGACTTACAAGGATATTTGGATGGCTACGGCAAAGACAAATACTACAATTTACCAGGATGTCTTTTCTTGCGTACCTAATGATCTGATACACACCAGACATGCCTTCAGACAAAGCGTGCTTTTTTGGAAAGAAAGGATTGGTCACACGACCATTGATTTAGGAATAGCCCCAGAAAATTTGGAATCCTATCGTGATGGAGGCATTAAGAACACCGATCCCTTGGAGAGATTAGCAGCAGTGAAGGGTCACCTGGTCTCTTTTCCCTTGGAGTTCATGTGTCAGGAAAGTCTGAGACCTGCTTTTAATGAAAGCGAATACTACGCCACTCAAGTTTTCCATTGA | 3369 | 0.4381 | MATEQLMSSGGPRYVQMKSSPPPSPPAATAEEMSSVPSFRHSGAEANRIFEELPKASIVSVSRPDASDISPMQLSYTIQVQYRQFKWELMKKAHQVFILHFALKKRAFIEEIHEKQEQVKEWLQNLGIGEHNAMEQDDDEGDDETIPLHTDETHESARDRDVPSSAALPIIRPALGRQQSIAERAKRAMQGYLNHFLGNISIVNSHEVCKFLEVSKLSFSPEYGPKLKEEYVMVKHLPKILKDDDSRKCCLSDCFSCCNDNWQKVWAVLKPGFLALLADPFDTQPLDIIVFDVLPASDGNGDGRLSLASEMKERNPLRHSFKVACGIRSIRIRVKNRSKVKDWVAAINDAGLRPPEGWCHPHRYGSFAPPRGLIEDGSQAQWFIDGRAAFEAIASAIEAAKSEIFICGWWLCPELYLRRPFHTHASSRLDNLLEGKAKQGVQIYILLYKEVALALKINSVYSKKKLLGIHENVRVLRYPDHFSTGVYLWSHHEKLVIIDNHICFIGGLDLCFGRYDTSEHKVGDFPPLIWPGKDYYNPRESEPNSWEDTMKDELDREKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKALYEEAIPLLMPQHHMVIPHYLGRSREIQIQSGNIDNQTVLKREDSFSSSSQDQDIPLLLPQESDGSDAHEGDQKLNGVISSSHCLDKPRRISTGLPFSFRKAKIVALGSDTPMKGFVDDLDSEHDREKMSLDRVAHSDLQNTDPEWWETQERGDQGGFPEESGQVGPLASCRCQVIRSVSQWSAGTSQTEESIHSAYCSLIEKAEYFIYIENQFFISGLSGDEMIRNRVLEALYRRIMRAYNDKKTFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGPNSILHNLYELLGPKIHDYISFYGLRSYGRLNGGPVATSQVYVHSKIMIVDDCITLIGSANINDRSLLGSRDSEIAVVIEDRELIGSYMDGKPWKAGKFSLTLRLSLWSEHLGLPTGEDNQIMDPVVESTYKDIWMATAKTNTTIYQDVFSCVPNDLIHTRHAFRQSVLFWKERIGHTTIDLGIAPENLESYRDGGIKNTDPLERLAAVKGHLVSFPLEFMCQESLRPAFNESEYYATQVFH* | 1123 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra5g0107 | 1122 | MobiDBLite | consensus disorder prediction | 637 | 669 | - | - | |
Vra5g0107 | 1122 | CDD | PH_PLD | 203 | 350 | - | - | |
Vra5g0107 | 1122 | PANTHER | PHOSPHOLIPASE D | 39 | 1119 | IPR015679 | - | |
Vra5g0107 | 1122 | MobiDBLite | consensus disorder prediction | 637 | 652 | - | - | |
Vra5g0107 | 1122 | PIRSF | PLD_euk | 614 | 1122 | IPR016555 | GO:0004630|GO:0006654|GO:0048017 | |
Vra5g0107 | 1122 | PIRSF | PLD_euk | 27 | 624 | IPR016555 | GO:0004630|GO:0006654|GO:0048017 | |
Vra5g0107 | 1122 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Vra5g0107 | 1122 | Gene3D | Endonuclease Chain A | 746 | 979 | - | - | |
Vra5g0107 | 1122 | SUPERFAMILY | Phospholipase D/nuclease | 335 | 606 | - | - | |
Vra5g0107 | 1122 | SMART | pld_4 | 487 | 514 | IPR001736 | GO:0003824 | |
Vra5g0107 | 1122 | SMART | pld_4 | 919 | 946 | IPR001736 | GO:0003824 | |
Vra5g0107 | 1122 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Vra5g0107 | 1122 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 919 | 946 | IPR001736 | GO:0003824 | |
Vra5g0107 | 1122 | Gene3D | - | 255 | 352 | IPR011993 | - | |
Vra5g0107 | 1122 | Gene3D | Endonuclease Chain A | 374 | 609 | - | - | |
Vra5g0107 | 1122 | SUPERFAMILY | Phospholipase D/nuclease | 760 | 969 | - | - | |
Vra5g0107 | 1122 | MobiDBLite | consensus disorder prediction | 134 | 162 | - | - | |
Vra5g0107 | 1122 | Pfam | Phospholipase D Active site motif | 487 | 514 | IPR001736 | GO:0003824 | |
Vra5g0107 | 1122 | MobiDBLite | consensus disorder prediction | 147 | 161 | - | - | |
Vra5g0107 | 1122 | SUPERFAMILY | PH domain-like | 258 | 350 | - | - | |
Vra5g0107 | 1122 | CDD | PLDc_vPLD1_2_yPLD_like_2 | 780 | 963 | - | - | |
Vra5g0107 | 1122 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 487 | 514 | IPR001736 | GO:0003824 | |
Vra5g0107 | 1122 | CDD | PLDc_vPLD1_2_yPLD_like_1 | 380 | 524 | - | - | |
Vra5g0107 | 1122 | Pfam | PLD-like domain | 793 | 966 | IPR025202 | - | |
Vra5g0107 | 1122 | PANTHER | PHOSPHOLIPASE | 39 | 1119 | - | - | |
Vra5g0107 | 1122 | Coils | Coil | 105 | 125 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra5g0107 | Vra-Chr5 | 843832 | 855725 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra5g0107 | 1 | 998 | Phospholipase D Gene Family (Wang group) | AT3G16785 | 72.782 | 0.0 | 1398 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra5g0107 | K01115 | - | gmx:100780514 | 2156.72 |