Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0077 ATGGCGAAGTCTAAGAATCACACAGCTCATAACCAGTCCTACAAGGCCCACAAAAATGGCATCAAGAAGCCCAAGAGGCATCGCCACACTTCCACCAAAGGGATGGACCCCAAGTTTCTGAGGAATCAGAGGTACGCTAGGAAGCACAACAAGAAGAATGGGGAAACTGCTTCCGAGGAAGAGTAA 186 0.4892 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKNGETASEEE* 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0077 61 MobiDBLite consensus disorder prediction 1 32 - -
Vra5g0077 61 Gene3D - 1 61 - -
Vra5g0077 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 IPR002673 GO:0003735|GO:0005840|GO:0006412
Vra5g0077 61 Pfam Ribosomal L29e protein family 3 42 IPR002673 GO:0003735|GO:0005840|GO:0006412
Vra5g0077 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 - -
Vra5g0077 61 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0077 Vra-Chr5 607374 608166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0077 1 61 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 86.885 9.73e-34 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0077 K02905 - gmx:100803210 129.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2787 7 48135338 48136106 Vra5g0077 5 607374 608166 PCT