Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra5g0038 | ATGGACTTGATACAACAAGTTAAAGGCACTTATTCTGATAGCAGGGAGGAAGAGGAGGAAGAGGAAGTGACAGAGATTATTGGTATCACAAGAGAAGCAGAAAGCAGCAGGTTACACCACCAAGATGCCGCATCCAATTTTGGAAAGAAGCTAGACCTCATGGAGTTGTCACTGGGGAGCAGCAAGGAAGAGGAAGGGGACGGCAATTTGCAAGGCGGAGGAGGAGGAGGACCGGTTCATCATCATCATCATCACCATCATCACCAGCAGCAGCAGCAGCAGCATGAACATCATCATCATCATGACGGTCACGGAACTTGTTCAAACGCCAAGGAAGTAGTGGAGAAAGAGCACATGTTTGACAAAGTGGTGACACCGAGCGATGTGGGGAAGCTGAACAGGCTGGTGATACCGAAGCAGCACGCGGAGAAGTACTTCCCCCTTGATTCGTCGTCGAACGAGAAGGGTCTGCTCCTGAATTTCGAAGACCGGAATGGGAAGGTGTGGCGGTTCAGATATTCGTATTGGAACAGCAGCCAGAGCTATGTGATGACAAAAGGGTGGAGCCGTTTCGTGAAGGAGAAGAAGCTGGATGCAGGTGACATTGTTTCCTTCCAGCGTGGCCTTGGAGATATGTATAGACATAGGTTGTACATAGATTGGAGGAGAAGGACTGATCATGGCCATCCTCCCTCTGATCCCTCCGCCTCCCCTTTGTTTCTTCCCTCTATCAGATGGTACTCCCTTCCCGCCACCTCCCCCATCGTTCCACCCCGCTACCACCACGATCATCACTTTCACCATCTCAATTACAACAACCTCTTCACTTTCCAGCACCAACACCAGTACCTTGGTCATGCTCATGCTCACGGTGCTGCCACTTCCGCCGCCGCCGCTGCCGCCGCCCATCATCACAACAACTATGGCGAGCATAATTCGGGATCTGGGACCGGCTCACTCTATTACCTCAGGTCCTCCATGCCAATGGGTGGTGGTGCTGATCAAAACTTGGCAGGCAGAGGGAATAGCATTGTGCCCATGATCATCGACTCGGTGCCGGTGAACGTGGGTCATCATAACCATCGGCATGGGCACGGTGGCATGTCGAGTGGCGGAGGTAGTTCTACCACAAGTAGTGGAAAACGACTGAGGCTATTTGGGGTGAACATGGAGTGTGCCTCTTCGGGGGAAGATTCGAAAGGCTTGTCTTTGGGTTCGGCAGCGCATGTCACAGTGGGCAATTCACTTCCTTCTTCTTCGTCACTACAGCAACGGTTGAGGATGCCCCATGAAGACCCCATTTCTTCTTCAGCAAGGTTCGGTGATCACAAAGGCGGAACCGGGACTTCTCTGCTGTTTGATTTGGATCCTTCCTTGCAGTATCATCAGTAG | 1392 | 0.5187 | MDLIQQVKGTYSDSREEEEEEEVTEIIGITREAESSRLHHQDAASNFGKKLDLMELSLGSSKEEEGDGNLQGGGGGGPVHHHHHHHHHQQQQQQHEHHHHHDGHGTCSNAKEVVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKVWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGLGDMYRHRLYIDWRRRTDHGHPPSDPSASPLFLPSIRWYSLPATSPIVPPRYHHDHHFHHLNYNNLFTFQHQHQYLGHAHAHGAATSAAAAAAAHHHNNYGEHNSGSGTGSLYYLRSSMPMGGGADQNLAGRGNSIVPMIIDSVPVNVGHHNHRHGHGGMSSGGGSSTTSSGKRLRLFGVNMECASSGEDSKGLSLGSAAHVTVGNSLPSSSSLQQRLRMPHEDPISSSARFGDHKGGTGTSLLFDLDPSLQYHQ* | 464 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra5g0038 | 463 | MobiDBLite | consensus disorder prediction | 360 | 380 | - | - | |
Vra5g0038 | 463 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 | 83 | 405 | - | - | |
Vra5g0038 | 463 | Gene3D | - | 113 | 230 | IPR015300 | - | |
Vra5g0038 | 463 | CDD | B3_DNA | 118 | 207 | IPR003340 | GO:0003677 | |
Vra5g0038 | 463 | SMART | B3_2 | 120 | 225 | IPR003340 | GO:0003677 | |
Vra5g0038 | 463 | Pfam | B3 DNA binding domain | 120 | 224 | IPR003340 | GO:0003677 | |
Vra5g0038 | 463 | ProSiteProfiles | B3 DNA-binding domain profile. | 120 | 225 | IPR003340 | GO:0003677 | |
Vra5g0038 | 463 | MobiDBLite | consensus disorder prediction | 78 | 94 | - | - | |
Vra5g0038 | 463 | MobiDBLite | consensus disorder prediction | 60 | 107 | - | - | |
Vra5g0038 | 463 | MobiDBLite | consensus disorder prediction | 414 | 463 | - | - | |
Vra5g0038 | 463 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 83 | 405 | IPR044800 | GO:0003700 | |
Vra5g0038 | 463 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Vra5g0038 | 463 | SUPERFAMILY | DNA-binding pseudobarrel domain | 117 | 222 | IPR015300 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra5g0038 | Vra-Chr5 | 317000 | 320218 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra5g0038 | 110 | 396 | RAV Transcription Factor Family | AT2G46870 | 50.512 | 7.41e-77 | 241 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra5g0038 | - | - | vun:114162133 | 711.449 |