Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0022 ATGGCTTCTCCATATCATCTCAGAAGAAGCATTCTGGTTTTGCTGTTGGTGACAGCTTCAGCTTGGGAAGAAGAGAAGAAAACATTCATAGTGCAAGTGCAGCACGATGCGAAGCCTTCGATCTTCCCCACGCACAGGCACTGGTACGAATCATCACTGGGCGAGGCCACCTCCATAATCCACACCTACCAAACAGTCTTCCACGGATTCTCTGCAACTCTCTCCGCCGCGGAGGTGGAGAACCTGGAGTCACTCTCCCACGTCATAGCCCTCATACCCGAGCAGGTGCGCCAACTCCACACCACGCGCTCCCCTCACTTCCTCGGCCTCAACACCGCCGACAGGGCTGGCTTGCTAAAGGAAACCGATTTCGGCTCCGATCTCGTCATCGGACTCATCGACACCGGCATTTCACCCGAAAGCCAGAGCTTTAACGACCGCGACTTAGGCCTCCCTCCCCCCAACTGGAAGGGTCAATGCGTCGCCGGAAAAGGCTTCCCCCCCAACTCCTGTAACCGCAAGCTCATCGGAGCCCGCTACTTCTGCGGCGGTTACGAAGCCACCAACGGCAAAATGAACGAAACACTCGAGTACCGTTCTCCTAGAGACACCGACGGTCACGGTACCCACACCGCTTCCATCGCCGCCGGCAGGTACGTCTTTCCGGCCTCCATCATGGGCTACGCCAAGGGAATGGCCGCTGGGATGGCTCCCAAGGCTCGTCTCGCCGTCTACAAGGTCTGCTGGAACGCTGGCTGCTACGACTCCGACATCCTGGCAGCATTCGACGCCGCCGTGGCCGACGGTGTTAACGTGGTCTCTCTGAGCGTCGGGGGCGTCGTGGTGCCCTACCACCTGGACGTGATCGCTGTGGGGGCCTTCGGAGCCTCGGAGGCTGGCGTGTTCGTGTCTGCCTCGGCGGGGAACGGCGGTCCCGGCGGGCTGACGGTGACGAATGTGGCACCCTGGATGACGACTGTGGGGGCTGGAACCATAGACAGAGATTTCCCCGCGGATGTTATTCTGGGGAACGGGAAGGTGATTGGTGGAGTGAGTGTCTACGGTGGGCCGGGTCTGAGTCCGGGTCGGCGGTACCAGTTGGTGTATGCTGGGTCTGACGGTTACTCTTCCTCTCTCTGCTTGGAAGATTCCTTGGACCCTAAATCCGTGAGGGGTAAGATTGTTGTATGTGACAGAGGCGTCAATTCAAGGCCTGCCAAAGGCCTAGTCGTGAAGAATGCTGGTGGAGTTGCCATGATTTTGGCCAATGGTCCCTTCGATGGAGAAGGTCTGGTAGCTGACTGCCACGTCCTCCCGGCCACCTCCGTCGGTGCCGCTGGGGGCGACCAAATTCGAAGATACATCTCGTTGGCCTCACAGTTACGGTCGCCACCCACCGCAACCATTTTATTCAGGGGCACGAGGGTTGGGGTTAAGCCAGCGCCAAAGGTGGCATCTTTCTCGGCCAGAGGGCCTAATCCGGTTTCCCCTGAGATTTTGAAGCCCGATGTGATTGCGCCTGGATTGAACATTCTTGCCGCATGGCCTTCTTACATTCCTCCTTCTTCCCTTCCTTCCGACCACCGTACCACTGACTTCAACATACTCTCCGGCACCTCTATGGCCTGCCCTCACGTCTCTGGTTTGGCTGCTCTTTTGAAAGCGGCCCACCCTGACTGGAGTCCCGCCGCCATAAGATCTGCTCTTATCACCACTGCCTACACTCTCGACAATGGAGGAGGTGGAGGGACCTTGTTGGACGAGTCCACTGGGAATGCTTCTTCGGTCTTCGATTATGGGGCTGGCCACGTTCACCCGGAGAAGGCCATCAACCCCGGTCTGGTCTATGACATTTCCACCTACGATTACATCGATTTCCTCTGCAATTCCAACTACACTGCCCACAATATTCGGGTTATCACCAGAAAGGCCGCAGACTGCAGTGGAGCAAAGAGGGCCGGTCACGCTGCCAATCTCAATTACCCCTCTTTATCTGCTGTCTTTCAACAGTATGGCAAGCAAGGCTCGCGCATGTCTACACACTTCATTAGAACTGTCACCAACGTTGGAGACCCCAACTCCCTTTACAGGGTTACTGTTGCAGCCCCTGCCGACACCGAGGTCACTGTTGAACCGGACACACTGGCTTTCAGGAGGTTGGGTCAGAAACTGAACTTCCTTGTGAGGGTGCAAACAAGGGAAGTGAAGCTTTCACCCGGGAGTTCAACTGTCAAGACTGGCTCCATAGTTTGGTCTGATGCCAAGCACACTGTCACCACTCCCTTGGTTGTCACCATGCACCAACCTCTCTGA 2313 0.5681 MASPYHLRRSILVLLLVTASAWEEEKKTFIVQVQHDAKPSIFPTHRHWYESSLGEATSIIHTYQTVFHGFSATLSAAEVENLESLSHVIALIPEQVRQLHTTRSPHFLGLNTADRAGLLKETDFGSDLVIGLIDTGISPESQSFNDRDLGLPPPNWKGQCVAGKGFPPNSCNRKLIGARYFCGGYEATNGKMNETLEYRSPRDTDGHGTHTASIAAGRYVFPASIMGYAKGMAAGMAPKARLAVYKVCWNAGCYDSDILAAFDAAVADGVNVVSLSVGGVVVPYHLDVIAVGAFGASEAGVFVSASAGNGGPGGLTVTNVAPWMTTVGAGTIDRDFPADVILGNGKVIGGVSVYGGPGLSPGRRYQLVYAGSDGYSSSLCLEDSLDPKSVRGKIVVCDRGVNSRPAKGLVVKNAGGVAMILANGPFDGEGLVADCHVLPATSVGAAGGDQIRRYISLASQLRSPPTATILFRGTRVGVKPAPKVASFSARGPNPVSPEILKPDVIAPGLNILAAWPSYIPPSSLPSDHRTTDFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALITTAYTLDNGGGGGTLLDESTGNASSVFDYGAGHVHPEKAINPGLVYDISTYDYIDFLCNSNYTAHNIRVITRKAADCSGAKRAGHAANLNYPSLSAVFQQYGKQGSRMSTHFIRTVTNVGDPNSLYRVTVAAPADTEVTVEPDTLAFRRLGQKLNFLVRVQTREVKLSPGSSTVKTGSIVWSDAKHTVTTPLVVTMHQPL* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0022 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED 23 770 - -
Vra5g0022 770 Gene3D Peptidase S8/S53 domain 127 623 IPR036852 GO:0004252|GO:0006508
Vra5g0022 770 Gene3D - 627 767 - -
Vra5g0022 770 Pfam Subtilase family 125 587 IPR000209 GO:0006508|GO:0008236
Vra5g0022 770 CDD PA_subtilisin_like 339 469 - -
Vra5g0022 770 Pfam PA domain 365 451 IPR003137 -
Vra5g0022 770 Gene3D - 333 477 - -
Vra5g0022 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 100 IPR037045 -
Vra5g0022 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 538 548 IPR023828 -
Vra5g0022 770 CDD Peptidases_S8_3 98 574 IPR034197 -
Vra5g0022 770 PRINTS Subtilisin serine protease family (S8) signature 125 144 IPR015500 -
Vra5g0022 770 PRINTS Subtilisin serine protease family (S8) signature 203 216 IPR015500 -
Vra5g0022 770 PRINTS Subtilisin serine protease family (S8) signature 537 553 IPR015500 -
Vra5g0022 770 SUPERFAMILY Protease propeptides/inhibitors 27 92 - -
Vra5g0022 770 SUPERFAMILY PA domain 359 451 IPR046450 -
Vra5g0022 770 Pfam Fibronectin type-III domain 658 764 IPR041469 -
Vra5g0022 770 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.5 23 770 - -
Vra5g0022 770 SUPERFAMILY Subtilisin-like 99 614 IPR036852 GO:0004252|GO:0006508
Vra5g0022 770 ProSiteProfiles Serine proteases, subtilase domain profile. 104 610 - -
Vra5g0022 770 Pfam Peptidase inhibitor I9 28 100 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0022 Vra-Chr5 223215 226298 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0022 28 770 Subtilisin-like Serine Gene Family AT3G14240 73.971 0.0 1127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0022 - - gmx:100784180 1320.45