Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0014 ATGTCTAGAGCAGAAGAAGATGATGGAAGAAAGAGCACGGAGGAAACTGGTGTAACAGTAGAGGCAGAGAAGAACCTTAAGCTGAAAGAGCGAAAGGTATCATGGGCAAAACTAAGACGCATAGATTCTCTAAATTTAGAGGCCGGAAGAGTTTCTATGGTTGCACACAACCCTCACAAGATGGGATGGAGAATTACTCTCAGCTTAGCATTTCAAAGTATAGGAGTTGTATATGGTGATATTGGGACATCACCCCTTTATGTATATGCCAGCACTTTCACTGATGGAATCAAACATAATGATGATATTCTGGGTGTCTTGTCCCTTATCATCTACACCATCCTCTTTATACCTATGATCAAATACGTTTTCATCGTATTGTGGGCTAACGACAATGGCAACGGTGGAGCCTTTGCACTGTATTCATTAATATGTAGACACATAAAAATGAGTTTGATTCCAAATGAACAACCAGANGATAGGGAGCTTTCTAATTACAAACTAGAAACNCCATCGAGTCAGGTNAAACGAGCTCACAAACTAAAGCAGAAACTCGAAGGCAGTAATGTTGCAAAAGTTGTGCTTGTGCTTCTTGCAATAATGGGAACTTCCATGGTTATAGGAGACGNCATTCTTACTCCATCAATATCAGTACTTTCAGCTGTAAGTGGGATCAGTAAATCATTAGGTCAAGATGCTGTTGTGGGAATCACAATAGCAATTTTGGTAGTCCTATTTTCTGTTCAACGATTCGGTACTGATAAAGTGGGGTTCTCCTTTGCTCCAATTATCTTGATGTGGTTTTTGTTCATCGCTGGAATTGGTTTTTACAACTTATTCAAATATGACATTGGAGTATTACGTGCCTTTTATCCAAAATATATATATGATTACTTCAAACGTAATGGAAAGAAAGGATGGTTATCACTTGGTGGAGTTTTTTTATGCATAACAGGATCTGAGGCTATGTTTGCTGACTTAGGTCACTTTAATGTGCGAGCCATTCAGATAAGCTTTTCTTTCATTACATGTCCATCAATCGTGATTGCATACATTGGGCAAGCAGCATATTTGAGGAAGTTTCCTGACAATGTAGCTAATACTTTCTATGATTCCATTCCAGGTCCCTTATATTGGCCAACTTTTGTTGTGGCTGTTGCTGCTGCCATTATAGCTAGTCAAGCAATGATTTCAGGAGCATTCTCCATTATANCNCAAGCCNTAAGTCTAGGTTGTTTTCCAAGAGTTAGGGTNGTGCACACTTCCATCAAACATTATGGTCAGGTGTATATTCCCGAAATCAATTACATGTTCATGATTGCATGCATTGTGGTGTGTGCTGCCTTCAAGACCACAGAAAAGATTAGTCATGCATATGGGATTGCAGTTATTGGTGATATGATGATTTCAACAACTCTGGTTTCACTGATAATGCTTGTTTTATGGAAAAAGAGTCTATGGCTTGTGTCATTATTCTTCTTTGGATTCGGTTTCATTGAATTAGTTTATTTAACATCTCAACTGACCAAGTTCACAGGAGGAGGGTATTTTCCAATTGTATCAGCTATGTTCTTGACGTCGATTATGGGAATCTGGCANTATGTGCACAAAGAAANATNCATGTTTGAGTTAAAAAACAAGGTATCAAGTGCATATTTGAATGAAGTGGCGAGCAACCCAGATGTAAGGCGAGTGCCAGGAATTGGACTTTTGTACTCTGAGCTGGTGCAAGGCATTCCTCCTATATTTCCACACCTTATAGCTAGCATTCCATCTGTCCACTCAATTCTTGTGTTTGTGTCTATTAAAGCAATTCCCGTGAGTAGTGTTGCATCGGAGGAGAGGTTCTTGTTTCGACAGGTGGAGCCCAGAGAGTACAGAGTTTTTCGTTGTGTTGTGAGGCATGGTTACAATGATGTTCTTGAAGATCCTGCAAAGTTTGAGTCAGAACTTATACAAAATCTAAAGGCATTCATTCAAGAGGAGAATTATCATATGGTGGAAGTGGAGGGAATTGGAAATGCAATCGAACAAGCAACAGTTGTTGAAAGCAGTGATAAGAGGGAAACACATCGTTCCTCCAGTAGAATAATCCCCAATCAACCAGCATCAGCCTCATCTGACTCCATTCGATCATTGGGGGGCAGTGGCAACAAGTCATATGCTAACTTCCTTGCCCCACCCATCCATGGAGCTGAAGAGGAACTCAAATTCATAGAAAAAGCATTAGAGAAAGGCGTGGTGTACATGCTGGCAGAAGCAGAGGTTGTGGCTCACCCAAACTCCTCCATCATCAATAAGATCATTGTGAATTATGTGTACAGTTTCTTCCGAAAGAACTTTAGACAAGGTCAGAGTTCCATGGCAATCCCGCGCAACAGACTTCTTAAGATTGGAATGACATACGAAATATGA 2415 0.3996 MSRAEEDDGRKSTEETGVTVEAEKNLKLKERKVSWAKLRRIDSLNLEAGRVSMVAHNPHKMGWRITLSLAFQSIGVVYGDIGTSPLYVYASTFTDGIKHNDDILGVLSLIIYTILFIPMIKYVFIVLWANDNGNGGAFALYSLICRHIKMSLIPNEQPXDRELSNYKLETPSSQVKRAHKLKQKLEGSNVAKVVLVLLAIMGTSMVIGDXILTPSISVLSAVSGISKSLGQDAVVGITIAILVVLFSVQRFGTDKVGFSFAPIILMWFLFIAGIGFYNLFKYDIGVLRAFYPKYIYDYFKRNGKKGWLSLGGVFLCITGSEAMFADLGHFNVRAIQISFSFITCPSIVIAYIGQAAYLRKFPDNVANTFYDSIPGPLYWPTFVVAVAAAIIASQAMISGAFSIIXQAXSLGCFPRVRVVHTSIKHYGQVYIPEINYMFMIACIVVCAAFKTTEKISHAYGIAVIGDMMISTTLVSLIMLVLWKKSLWLVSLFFFGFGFIELVYLTSQLTKFTGGGYFPIVSAMFLTSIMGIWXYVHKEXXMFELKNKVSSAYLNEVASNPDVRRVPGIGLLYSELVQGIPPIFPHLIASIPSVHSILVFVSIKAIPVSSVASEERFLFRQVEPREYRVFRCVVRHGYNDVLEDPAKFESELIQNLKAFIQEENYHMVEVEGIGNAIEQATVVESSDKRETHRSSSRIIPNQPASASSDSIRSLGGSGNKSYANFLAPPIHGAEEELKFIEKALEKGVVYMLAEAEVVAHPNSSIINKIIVNYVYSFFRKNFRQGQSSMAIPRNRLLKIGMTYEI* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0014 804 MobiDBLite consensus disorder prediction 695 712 - -
Vra5g0014 804 TIGRFAM kup: potassium uptake protein 69 804 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vra5g0014 804 PANTHER POTASSIUM TRANSPORTER 5 27 803 - -
Vra5g0014 804 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 27 803 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vra5g0014 804 MobiDBLite consensus disorder prediction 683 712 - -
Vra5g0014 804 Pfam K+ potassium transporter 70 639 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0014 Vra-Chr5 155901 160322 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0014 27 804 Inorganic Solute Cotransporters AT4G13420 57.841 0.0 932
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0014 K03549 - gmx:100814313 1295.8