Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0013 ATGGATGATTTTGTTGAAGGAAGAGAAGCTGGTGTGGTGTGTGTTTCAGCAGGTGATTTGAATTCGCGGTGTAGATTGGAGAAGCTTGATGAACGAATTGGGGTTTTGCAGGATTCGCGTGCTAGATTGGACGAAGGTAATGAGGTGGCTAATGGTGGTCCTGAGGAGAAGCAGTGGTGGCTATTCTGGGTCGCGTTGGATCTAGAAGAAAAAGAAGAAAGTGTATTGAGAGTGAAGATGACCGGAGCAGAAGGAAAACTAAGGCACATAAATTCTTTGAGTTTAGAGGCTGGAAGAGTTTGTATGGATGCACACAAGATGGGATGGAGAATTACTCTTAGCTTAGCTTTTCAAAGCCTAGGAATTGTATATGGTGATATTGGGACATCACCCCTTTACGTATATGCTAGCACCTTCACCAATGGAATCAAACATAACGATGATATTTTGGGTGTCTTGTCCCTTATCATCTATACCATCCTCCTCATTCCTATGATTAAATACGTCTTCATCGTACTGTGGGCTAACGACAATGGCAACGGTCCCTTATATTGGCCAACTTTTGTTGTGGCTGTTGCTGCTGCCATTATAGCTAGTCAAGCAATGATTTCAGGAGCATTCTCCATTATAGCTCAAGCCCTAAGTCTAGGTTGTTTTCCAAGAGTTAGGGTGGTGCACACTTCCATCAAACATCATGGTCAAGTGTATATTCCTGAAATCAACTACATGTTCATGATCGCATGTATTGTGGTGTGTGCTGCCTTCAAGACCACGGAAAAGATTAGTCATGCATATGGGATTGCAGTTATTGGTGATATGATGATTACAACAACTCTAGTTTCGCTGATAATGCTTGTTTTATGGGAAAAGAGTCTATGGCGTGTGACATTATTCTTCTTTGGATTCAGTTTCGTTGAATTACTTTATTTAACATCTCAACTGACCAAGTTCACAGGAGGAGGATATTTTCCAATTGTATCAGCTATGTTCTTGACGTCGATTATGGGAATTTGGCACTATGTACACAAAGAAAGATACATGTTTGAGTTAAAAAACAAGGTATCAAGTGCATATCTGAATGAAGTGGCGAACAACCCAAATGTAAGGCGAGTGCCAGGAATTGGACTTTTGTATTCCGAGTTAGTGCAAGGTATTCCTCCCATATTCCCACACCTTATAGCTAGCATTCCATCTGTCCATTCAATTCTTGTGTTTGTGTCTATTAAAACAATCCCGGTGAGTAGTGTTGCATCTGAGGAAAGGTTCTTGTTTCGACGAGTGGAGCCAAGAGAGTACAGAGTTTTTCGTTGTGTTGTGAGGCATGGTTACAATGACCTTTTTTTAGATCTTGTAAAGTTTGAATCAGAATTGATACAAAATTTAAAGACATTCATTCAAGAGGAGAACTACCATATGGTGGAGGTGGAGGGAAGTGGAAATGCAATCGAACAAGCAGTGGTAGTTGAAAGCAGTGATAAGAGTGAAGCACATTGTTCCTTAAGTAGAATAATCACCAATCAATCAGCATCATCTTCACCCGACTCCATTCGATCATTGAGGGGGAGTGACACCAAGTTATCTGCTAACTTCCTTACCTCATCCATGCATGGAGCTGAAGAGGAACTCAAATTCATAGAAAAAGCATTGGAGAAAAACGTGGTGTACATGTTGGCAGAAGCAGAGGTTGTGGCTCACCCAAACTCCACCATCATCAATAAAATCATTGTGAATTATGTGTACAGTTTTTTTCGAAAGAACTTCAGACAAGGTCAAAGTTCCATGGCAATCCCTTGCAAGAGACTTCTCAAGATTGGAATGACCTATGAAATATGA 1833 0.4081 MDDFVEGREAGVVCVSAGDLNSRCRLEKLDERIGVLQDSRARLDEGNEVANGGPEEKQWWLFWVALDLEEKEESVLRVKMTGAEGKLRHINSLSLEAGRVCMDAHKMGWRITLSLAFQSLGIVYGDIGTSPLYVYASTFTNGIKHNDDILGVLSLIIYTILLIPMIKYVFIVLWANDNGNGPLYWPTFVVAVAAAIIASQAMISGAFSIIAQALSLGCFPRVRVVHTSIKHHGQVYIPEINYMFMIACIVVCAAFKTTEKISHAYGIAVIGDMMITTTLVSLIMLVLWEKSLWRVTLFFFGFSFVELLYLTSQLTKFTGGGYFPIVSAMFLTSIMGIWHYVHKERYMFELKNKVSSAYLNEVANNPNVRRVPGIGLLYSELVQGIPPIFPHLIASIPSVHSILVFVSIKTIPVSSVASEERFLFRRVEPREYRVFRCVVRHGYNDLFLDLVKFESELIQNLKTFIQEENYHMVEVEGSGNAIEQAVVVESSDKSEAHCSLSRIITNQSASSSPDSIRSLRGSDTKLSANFLTSSMHGAEEELKFIEKALEKNVVYMLAEAEVVAHPNSTIINKIIVNYVYSFFRKNFRQGQSSMAIPCKRLLKIGMTYEI* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0013 610 Pfam K+ potassium transporter 116 181 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vra5g0013 610 Pfam K+ potassium transporter 183 445 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vra5g0013 610 PANTHER POTASSIUM TRANSPORTER 5 183 609 - -
Vra5g0013 610 PANTHER POTASSIUM TRANSPORTER 5 84 181 - -
Vra5g0013 610 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 183 609 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vra5g0013 610 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 84 181 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0013 Vra-Chr5 147297 153347 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0013 177 610 Inorganic Solute Cotransporters AT4G13420 47.235 1.55e-138 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0013 K03549 - gmx:100814313 654.44