Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1379 ATGCCTAGATCAACAGATCCTCTTGTTATAGGAGGTGTAATAGGTGATGTTTTGGAGCCATTTACAAGTTCTGTTTCTCTCAGGATACTTTACAACAATTCCTTTCAAGTTATCAACTGTTGTGAGCTCAAACCCTCACAAGTACTAAACCAACCAAGAGTTGAAATTGGTGGAGATGATTTCAGAACCCTTTACTCTCTGGTGATGGTGGATCCTGATGCACCTAGTCCAGGAAATCCAAATCAGAGGGAATATCTGCACTGGTTAGTAGCCAATATTCCAGGAACTACAGGAACAAACTTCGGCGAAGAGGTTGTCGGGTACGAAGGTCCACGACCAGTGATGGGGATTCATCGTATTGTTTTCATACTGTTTCGTCAACCTAGCAGACAAACTGTGTACGCTCCAGGATGGCGACAAAATTTCAACACCAGAGATTTTAGTGAGCTTTATAATCTTGGATCACCAGTTGCAGCAGCCTACTTCAACTGCAAACGACAACTTGATTCTACTCGAAGGAGATAA 525 0.4267 MPRSTDPLVIGGVIGDVLEPFTSSVSLRILYNNSFQVINCCELKPSQVLNQPRVEIGGDDFRTLYSLVMVDPDAPSPGNPNQREYLHWLVANIPGTTGTNFGEEVVGYEGPRPVMGIHRIVFILFRQPSRQTVYAPGWRQNFNTRDFSELYNLGSPVAAAYFNCKRQLDSTRRR* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1379 174 PANTHER PROTEIN, PUTATIVE-RELATED 5 174 - -
Vra4g1379 174 SUPERFAMILY PEBP-like 12 166 IPR036610 -
Vra4g1379 174 Pfam Phosphatidylethanolamine-binding protein 52 161 IPR008914 -
Vra4g1379 174 Gene3D - 2 173 IPR036610 -
Vra4g1379 174 CDD PEBP_euk 25 164 IPR035810 -
Vra4g1379 174 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
Vra4g1379 174 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 5 174 IPR035810 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1379 Vra-Chr4 20505829 20507305 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1379 K16223 - gmx:100815541 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g1379 4 20505829 20507305 Vra1g0034 1 465151 468404 PCT