Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1371 ATGGCAGATTCTTCTAGGGAAGAGAACGTTTACATGGCGAAGTTGGCCGAGCAGGCCGAGCGGTATGAGGAGATGGTTGAGTTCATGGAGAAGGTAGCGAAGACTGTGGAGGTCGAGGAGTTGACTGTGGAGGAGAGGAATCTTCTCTCTGTGGCGTACAAGAACGTGATCGGGGCGAGGAGGGCTTCGTGGAGGATTATATCCTCCATTGAGCAGAAGGAGGAGAGCAGAGGCAATGAGGACCACGTGGCTATTATAAAGGAGTACAGGGGAAAGATTGAGACCGAACTCAGCAAGATCTGTGATGGGATTTTGAACCTCCTTGAGTCCAACCTCATCCCTTCTGCTCAATCTCCCGAAAGTAAAGTCTTTTACCTTAAAATGAAGGGTGATTACCACAGGTACCTTGCTGAGTTTAAGACTGGGGCAGAGAGGAAAGATGCTGCAGAGAGTACTTTGCTTGCTTACAAATCCGCTCAGGATATTGCTCTTGCTGACCTGGCCCCCACCCACCCTATTAGGCTTGGACTTGCTCTCAACTTTTCTGTGTTCTATTATGAAATCCTTAACTCACCAGATCGTGCTTGTAATCTTGCCAAGCAGGCATTTGATGAGGCAATTTCTGAGCTTGACACATTGGGTGAAGAGTCATACAAAGATAGTACATTGATCATGCAACTTCTCCGTGACAACCTGACTTTGTGGACATCAGACATCACGGACGATGCTGGGGATGAGATCAAGGAGACAACCAAGCAACCAGGTGAATAG 771 0.4799 MADSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVEVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAIIKEYRGKIETELSKICDGILNLLESNLIPSAQSPESKVFYLKMKGDYHRYLAEFKTGAERKDAAESTLLAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKETTKQPGE* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1371 256 Pfam 14-3-3 protein 12 236 IPR023410 -
Vra4g1371 256 PANTHER 14-3-3 PROTEIN 3 253 IPR000308 -
Vra4g1371 256 PANTHER 14-3-3-LIKE PROTEIN GF14-F 3 253 - -
Vra4g1371 256 Coils Coil 12 39 - -
Vra4g1371 256 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Vra4g1371 256 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Vra4g1371 256 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Vra4g1371 256 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Vra4g1371 256 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Vra4g1371 256 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Vra4g1371 256 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Vra4g1371 256 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Vra4g1371 256 SUPERFAMILY 14-3-3 protein 5 238 IPR036815 -
Vra4g1371 256 PIRSF 14-3-3 1 248 IPR000308 -
Vra4g1371 256 SMART 1433_4 6 249 IPR023410 -
Vra4g1371 256 Gene3D - 1 249 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1371 Vra-Chr4 20428054 20430866 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1371 4 256 14-3-3 family AT3G02520 89.764 9.12e-169 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1371 K06630 - gmx:547657 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g1371 4 20428054 20430866 Vra4g1371 4 20428054 20430866 ECH