Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1368 ATGGCTACCATTTCACTCAGGCATAACCCTCAAGTCAACAACACCAACCAGCAACGTGAAATCATCACCGAAGAGATCCAAGGACTCATTAGAGTCCACAGAGATGGACGTGTAGAGAGACCACCGATTGTTCCTACTGTCTCCTGCACAGTCGCATCATCATCATCATCATCATCGTCTTCAAGTGCCAAAGATGTTATCATCAACAAAGAGACAAACTTATGGGCACGTGTTTATGTGCCTTCAATGAGTTATCACACAAAGCCTCTTCCTTTGCTTGTGTACTTCCATGGTGGTGGATTCTGTGTTGGTTCTGCTGCTTGGAGCTGTTACCACGAGTTCTTGACCAACCTTGCTTCCAAAGCAAACTGTGTCATTCTCTCTGTGGATTATCACTTAGCCCCAGAGAATCGTCTTCCTGTGGCATACGATGACGGTTTCAACGCTCTCAAGTGGGTCAAAAGAGAAGCGATGAACATCTCCGGTGCGCAAAAGTGGTGGCTGACTCACTGCGACATGTCTTCCGTTTTCCTCGCCGGTGATAGTGCAGGTGCCAACATAGCTTATAATGTGGCCACCCGCATGGGATCATCATCATCATCAAACGCGACGACACCATTATCCCTCAAGGGTGTCATACTGATCCAACCTTTCTTCGGAGGAGAAGAAAGAACTAGCTCTGAGAAGCATTTCCTTCAGCCACCCACTTCAGCGCTCACTTTATCCGTTTCCGACACTTATTGGCGCTTGGCGCTTCCTCTTGGAGCCACCCGTGACCACCCATATTGCAACCCTCTTGCACATGGCACGGTCAAGTTGAGAGATTTGAGGGTTTCTTCCATCATGGTGTGCGTTTCAGAAATGGATATACTGAAAGATAGGAACTTGGAGTTCTCAAAAGCTTTGGCTAAAGCAGGGAAAAGAGTTGAAACAGTTGTTTTCAAAGGCGTAGGACATGCCTTCCAAGTGCTGCATAATTACCAGCTTTCACATTCCCGAACCCAAGAAATGATAACCCATATCAGAAACTTTGTTTACCAGTAA 1044 0.4665 MATISLRHNPQVNNTNQQREIITEEIQGLIRVHRDGRVERPPIVPTVSCTVASSSSSSSSSSAKDVIINKETNLWARVYVPSMSYHTKPLPLLVYFHGGGFCVGSAAWSCYHEFLTNLASKANCVILSVDYHLAPENRLPVAYDDGFNALKWVKREAMNISGAQKWWLTHCDMSSVFLAGDSAGANIAYNVATRMGSSSSSNATTPLSLKGVILIQPFFGGEERTSSEKHFLQPPTSALTLSVSDTYWRLALPLGATRDHPYCNPLAHGTVKLRDLRVSSIMVCVSEMDILKDRNLEFSKALAKAGKRVETVVFKGVGHAFQVLHNYQLSHSRTQEMITHIRNFVYQ* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1368 347 PANTHER CARBOXYLESTERASE 6-RELATED 12 345 - -
Vra4g1368 347 Gene3D alpha/beta hydrolase 4 346 IPR029058 -
Vra4g1368 347 SUPERFAMILY alpha/beta-Hydrolases 48 336 IPR029058 -
Vra4g1368 347 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 176 188 IPR033140 -
Vra4g1368 347 Pfam alpha/beta hydrolase fold 93 322 IPR013094 GO:0016787
Vra4g1368 347 PANTHER ARYLACETAMIDE DEACETYLASE 12 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1368 Vra-Chr4 20406342 20407582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1368 1 346 Carbohydrate Esterase AT5G16080 52.825 6.88e-126 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1368 - - gmx:100819429 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g1368 4 20406342 20407582 Vra4g1368 4 20406342 20407582 ECH