Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1361 ATGGCTTCTTTCACTACTTCACCTTCACAGGTTGGGAAGAAGAAGGTTTTGTTCATAATGGGTGCAACTGGCTCAGGTAAGACCAAACTCTCCATCAGTTTGGCCATGCAATTTCCCTCTGAAATCATCAACTCTGACAAAATCCAAATTTATAAGGGTCTTGACATCATCACCAACAAGGTTTCAGAGTCTCAACGTTCTGGCATTCCCCATCATCTTCTTGCCATCGTTGACGACCCTGATTACGACTTCACCATTCATGACTTTTGCTATCATGTCCTTCACGCTCTTGATACCATCGTTCAAAACGGACACCTACCCATTATCGTGGGTGGCTCCAACACTTACCTCACAGCCTTGCTCGAGGACCCTGACGTTGCTTTTTGTTCCAAATATGATTGTTGTTTCATTTGGGTCGATGTGTCTTTACCAGTGTTGTTTCCTTATCTGGACAAAAGGGTGGACGAAATGGTTGATGCTGGAGTTGTGGATGAGATTCGAGAAGCTTTTGTTGCTGGAGCAGATTGCAGTCGTGGGATTAGAAGAGCCATTGGAGTTCCTGAGCTTGGAGAGTTTTTCCTTCGGGAGAAGGAAATAGACGACGAGGCTCAGAAGGAGAAGATGCTACAACATGCTATTACGAAAACCAAAGAGAACACTCATAAGTTGGCTGAGAGACAACTCTCGAAGATCCGAAACATGAACCATGACTTCAAAATGTTCAGAATTGATTCCACACAAGTGTTTGAGGCTGTTTTAAATGGAGTGGATTATAAACAATTGTACGAAGAGATTGTGTTCAAACCATGCATGGAGATATTGAAGCAATTTCTAGAAGAGACAACTGTTGTGAAAAAGACATCTCAAATTGGTGAACAAGCCATGGTTTGTGTTTAA 897 0.4259 MASFTTSPSQVGKKKVLFIMGATGSGKTKLSISLAMQFPSEIINSDKIQIYKGLDIITNKVSESQRSGIPHHLLAIVDDPDYDFTIHDFCYHVLHALDTIVQNGHLPIIVGGSNTYLTALLEDPDVAFCSKYDCCFIWVDVSLPVLFPYLDKRVDEMVDAGVVDEIREAFVAGADCSRGIRRAIGVPELGEFFLREKEIDDEAQKEKMLQHAITKTKENTHKLAERQLSKIRNMNHDFKMFRIDSTQVFEAVLNGVDYKQLYEEIVFKPCMEILKQFLEETTVVKKTSQIGEQAMVCV* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1361 298 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 9 287 - -
Vra4g1361 298 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 124 IPR027417 -
Vra4g1361 298 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 143 240 - -
Vra4g1361 298 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 9 287 IPR039657 -
Vra4g1361 298 Gene3D - 13 278 IPR027417 -
Vra4g1361 298 Pfam IPP transferase 49 123 - -
Vra4g1361 298 Pfam IPP transferase 131 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1361 Vra-Chr4 20335802 20336698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1361 91 282 C2H2 Transcription Factor Family AT2G27760 31.364 2.73e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1361 K10760 - gmx:121173984 455.677