Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1298 TTCAATAGGAAGGATCTTTGCAAGAGCGTAAACCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTGCAGGCTGCTCTCTTGAATGAAGGCATTAAGAATGTTCCAAATTTGATATTGAAAGATGTTACTCCGCTTTCACTTGGCGTATCGGTACAGGGGGATCTGATGAGTGTTTTGATTCCTAGGAACACAACTATTCCTATAAAGAAGAAACAAGTTTTTCTGACATGCCAAGATGACCAATTCCTAGTCAAGATTAAGGTTTATGAGGGCGAGAGAGTGAAAGCCAGTGATAATGATTTGTTGGTTTCTTTTTCTATTTCTGGCTTTCCCCCAGCTCGTCGTGGCTATCCTTTTTATGTGACTTTTGCAATAAATGAAAATGGCATTCTTTCCGTTTCTGCTGAGGAAATAGTAACCGGTAATAGGGATGAAATTATAATATCCCATAAAGGAAGACTATCAAATGAAAAAATTAGTGAAATGATTAAAGAAGCAGAGAACTATAAGTTTGAAGATGAGAAGTTTCTTAAGAAGGCCAAAGCAATGAATGATTTAGATGATCATGTTTATAAGATCAAAAAGGCCTTAGAGAAGAAGAATTTCAGCTCAAAGTTGAGTTCGAAAAAAAAGAAAGATATCTGTTCTAAAATTTCTAGAGCCACTGATATGCTGGATAGGCGGAACGAGATGGAAGATATAGTTGCTATTGAAGACTTTCTGAAAGATCTTAAAGCAATCAGTGAACGAATTATGGTCATGGAGAAGATTGCCTAG 777 0.3719 FNRKDLCKSVNPDEAVAYGAAVQAALLNEGIKNVPNLILKDVTPLSLGVSVQGDLMSVLIPRNTTIPIKKKQVFLTCQDDQFLVKIKVYEGERVKASDNDLLVSFSISGFPPARRGYPFYVTFAINENGILSVSAEEIVTGNRDEIIISHKGRLSNEKISEMIKEAENYKFEDEKFLKKAKAMNDLDDHVYKIKKALEKKNFSSKLSSKKKKDICSKISRATDMLDRRNEMEDIVAIEDFLKDLKAISERIMVMEKIA* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1298 258 PRINTS 70kDa heat shock protein signature 10 30 - -
Vra4g1298 258 PRINTS 70kDa heat shock protein signature 36 55 - -
Vra4g1298 258 PRINTS 70kDa heat shock protein signature 116 132 - -
Vra4g1298 258 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 33 187 IPR029047 -
Vra4g1298 258 Gene3D - 183 255 IPR029048 -
Vra4g1298 258 Pfam Hsp70 protein 3 252 IPR013126 GO:0005524|GO:0140662
Vra4g1298 258 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 182 253 IPR029048 -
Vra4g1298 258 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 254 - -
Vra4g1298 258 PANTHER HEAT SHOCK PROTEIN 70KDA 1 254 IPR013126 GO:0005524|GO:0140662
Vra4g1298 258 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 32 182 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1298 Vra-Chr4 19807445 19808221 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1298 1 253 Calmodulin-binding Proteins AT3G12580 50.391 3.80e-75 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1298 K03283 - vra:106758509 473.396