Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1297 ATGAGCATCAACCCTGACGAGGCTGTTGCCTATGGAGCAGTACTACATGTTGCTTTGCCTACTAAAGGCAAAAAATTTGTCCCCAACTTAGTGCTATTGGATGTTACGCCACTGTCAATTGGTATATCTCTAAACGGAGATCTCATGAGTGTCGTGATTCCTAGGAACACCACCATTCCTGTTGTTAAAAAGAAAGGATATAAAAGAGCTGAAGATTTCAAATCCTCTGTCCCTATTAAGGTTTACAAAGGTGAAAGAAGAAGAGCAAGCGATAACAATTTGCTTGGTTTCTTTAATCTTAATGGCAATCCTAAAGCTCTTCGGGGTTATCCTTTAACTGAATGTTTCTGTATAGATGCTGATGATGATGTAGATAATCCAAAAGAGAAAACGAAGATCAACAAGGCAATTGCAGAGGCAATCAAATTGCTTGATGCTAGGGAGCAGACAGAAACAGAGGTTTTTGTGGATCAAAAGTGCCTCATCTTCACCTTCCCAGAATTGCCATATATGCATCCTTTAGAATATCCCATGCCTCCTTCCACGTAG 549 0.4026 MSINPDEAVAYGAVLHVALPTKGKKFVPNLVLLDVTPLSIGISLNGDLMSVVIPRNTTIPVVKKKGYKRAEDFKSSVPIKVYKGERRRASDNNLLGFFNLNGNPKALRGYPLTECFCIDADDDVDNPKEKTKINKAIAEAIKLLDAREQTETEVFVDQKCLIFTFPELPYMHPLEYPMPPST* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1297 182 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 121 - -
Vra4g1297 182 Pfam Hsp70 protein 2 124 IPR013126 GO:0005524|GO:0140662
Vra4g1297 182 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 21 159 IPR029047 -
Vra4g1297 182 PRINTS 70kDa heat shock protein signature 3 23 - -
Vra4g1297 182 PRINTS 70kDa heat shock protein signature 29 48 - -
Vra4g1297 182 PANTHER HEAT SHOCK PROTEIN 70KDA 1 121 IPR013126 GO:0005524|GO:0140662
Vra4g1297 182 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 28 146 IPR029047 -
Vra4g1297 182 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1297 Vra-Chr4 19791096 19791718 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1297 2 121 Calmodulin-binding Proteins AT3G12580 54.918 9.99e-34 124