Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1269 ATGTCCTACCAGCATAAAAGTTTTTGGATGCCACGAGATGCTGGCTGCATGGCTGAAGAAAATGTGGGATATGAAAATTCTTCCAGAATTGAACCCAAACGTAGTCATCAGTGGTTTATGGATACAGGTGAACCTGAAATATTCAGCAACAAGAAACAGGCTGTTGAAGATGTCAGTGGTAGGCCAATTTCAGGAGTTTCACATGTGAATGTTTCCCAATGGGACACCAATTCAGGATTTCACTGTGTCACTGGTCAATTTTCTGACCGTCTTTTTGGATCTGATCTTGCTAGGACAGTGAATTTGGTTGATAAGAATGTGCCATCTATTGTAAGTGGAAATATAAACATGGGAAGGAAGGAATTTGAGCATCAATATGGTAATGATCCTTCAGTGGGATTGTCAATATCTCATTCCATTGCGGACCCTTCATCATGTCTCAATTTTGGTGGCATCAGAAAAGTTAAAGTTAATCAAGTTAGAGATTCTGACAATTGCATGCCTTCTGCATCCATGGGGCACTCCTATAGCAGGGAAGATGATAGTACAATTTCAGTAGGTGCTGGCTACAGTAAGAATGATGGCAGTATTTCGTTGGGTCCTACTTATAACAATAGAAGTGACAACACCATTGGTATGGGGACCAGAATAAGTAGCAAGACTGATGACAATCTTCTTTCAGTGGCTCACAACTTCAATAAAGGGGATGGGGGTTTCATGCTGATGGGCCACAATTATGGAAAGGGAGATGATAGCATCTTATCAATGGGTCAGCCCTTTGACAAGGGAGATGGAAATTTCATATCAATGGGTCAATCATATGAGAAAGAAGATGGGAATCTAATATCTCTGGGCACCTCATATTCCAAGGGGCATGAGGGTTTTATATCAATTGGTCCAACCTATGGTAAATCAGGAGAGAATTTCATTACTGTTGCTCCTTATGACAAGGGTACTGATCATTTAATATCAATGGGTTCAACATATGATAAGGTGGATTCAAATATTGCATCAACAGTTCCATCATACGACAGAGGAGATTCCAGTTCTTTACCTGTGGGTCAAAATCACCATAAGGGTCAGAGCAGTACCATATCTTTTGGAGGTTTTCATGATGACCCTGAAGCAAATCCCTCTGGTGGAATAATTAGTGGCTATGATCTGTTGATAGGAAACCAAAACTCAGCTCAAGGTTTGGATGGTCAGAATGATCTGACTGAAACAAACACTGAATCACTTGTAAATAGCATTCCAAAACTTAATACTAAAAATGATATTGTTGTTAAGAACAAAGAGCCTAAGACAACAACCAAGAAGGCTCCTACGAACAACTTCCCTTCAAATGTCAAAAGTTTGCTGTCAACCGGTATATTTGATGGTGTCCAGGTGAAATATGTTTCATGGTCACGGGAGAAAAGTCTTAAAGGAATCATAAAAGGAACTGGGTATTTGTGTTCATGTGATGACTGCAAGCAGTCAAAGGCTCTTAATGCATATGAGTTTGAGCGTCATGCTGGTGCCAAGACAAAACACCCCAATAATCACATATACTTCGAGAATGGAAAAACCATCTATGCTGTTGTTCAAGAACTGAAAAATACTCCTCAGGAGATGCTTTTTGATGCAATTCAAAATGTGACTGGCTCTACCATCAACCAAAAGAACTTTCGAGGATGGAAAGCATCATACCAAGCTGCTACTCGGGAGCTTCAACGTATTTATGGAAAGGATGAAGTGATAATTCCATCTTGA 1752 0.4001 MSYQHKSFWMPRDAGCMAEENVGYENSSRIEPKRSHQWFMDTGEPEIFSNKKQAVEDVSGRPISGVSHVNVSQWDTNSGFHCVTGQFSDRLFGSDLARTVNLVDKNVPSIVSGNINMGRKEFEHQYGNDPSVGLSISHSIADPSSCLNFGGIRKVKVNQVRDSDNCMPSASMGHSYSREDDSTISVGAGYSKNDGSISLGPTYNNRSDNTIGMGTRISSKTDDNLLSVAHNFNKGDGGFMLMGHNYGKGDDSILSMGQPFDKGDGNFISMGQSYEKEDGNLISLGTSYSKGHEGFISIGPTYGKSGENFITVAPYDKGTDHLISMGSTYDKVDSNIASTVPSYDRGDSSSLPVGQNHHKGQSSTISFGGFHDDPEANPSGGIISGYDLLIGNQNSAQGLDGQNDLTETNTESLVNSIPKLNTKNDIVVKNKEPKTTTKKAPTNNFPSNVKSLLSTGIFDGVQVKYVSWSREKSLKGIIKGTGYLCSCDDCKQSKALNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDAIQNVTGSTINQKNFRGWKASYQAATRELQRIYGKDEVIIPS* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1269 583 MobiDBLite consensus disorder prediction 340 376 - -
Vra4g1269 583 MobiDBLite consensus disorder prediction 340 368 - -
Vra4g1269 583 PANTHER N-LYSINE METHYLTRANSFERASE 1 583 - -
Vra4g1269 583 PANTHER AUTOIMMUNE REGULATOR 1 583 - -
Vra4g1269 583 Pfam Tify domain binding domain 476 531 IPR032308 -
Vra4g1269 583 SUPERFAMILY Porins 176 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1269 Vra-Chr4 19601726 19607963 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1269 438 564 PHD Transcription Factor Family AT3G53680 55.906 8.95e-41 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1269 - - gmx:100782217 1076.23