LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra4g1262	ATGGCTCTTCCAAGACCAAGTACTGAAGAGAAAGCCCTTTCTCAGCTCAAAGAAGGAACAGCATCATCTTCAGCAGCACCACCTTCTTCATCTTCTTCATGGAATAATAGCCTTCACAATTTCTCTCCTTTGAATCTACACCACAAGACTAGCAAAATTGAAGACAGTGATGAAGATATGTTCACAGTTCCAGATGTGGAGATCACAGCCATTAATGTTCATTCTCAACCAAACAGTAACCTTAAACAATCTAACGTGACAGAACCTCAGTTTCAAACTGGTTTTCCTGGAAAGCGTCGCAGGGGAAGAAACCCTGCGGATAAGGAACATAGACGTCTCAAGAGGTTATTGCGAAATAGAGTTTCCGCTCAACAAGCTCGAGAAAGAAAGAAGGTTTATGTGAATGATTTGGAAGCAAGAGCCAAAGAGTTACAAGATAAAAATGCTATCTTAGAAGAACGTATCTCTACTTTGATCAATGAGAACACCATGCTTAGGAAGGTTCTTATGAATGCGAGGCCAAAAGTTGATGATAGCAATGAACAAAAGCAAGAACAGTTAAGTAAGAGCTAA	573	0.4014	MALPRPSTEEKALSQLKEGTASSSAAPPSSSSSWNNSLHNFSPLNLHHKTSKIEDSDEDMFTVPDVEITAINVHSQPNSNLKQSNVTEPQFQTGFPGKRRRGRNPADKEHRRLKRLLRNRVSAQQARERKKVYVNDLEARAKELQDKNAILEERISTLINENTMLRKVLMNARPKVDDSNEQKQEQLSKS*	191

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Vra4g1262	190	MobiDBLite	consensus disorder prediction	76	92	-	-
Vra4g1262	190	SMART	brlzneu	107	171	IPR004827	GO:0003700\|GO:0006355
Vra4g1262	190	MobiDBLite	consensus disorder prediction	13	42	-	-
Vra4g1262	190	Gene3D	Single helix bin	130	171	-	-
Vra4g1262	190	MobiDBLite	consensus disorder prediction	76	109	-	-
Vra4g1262	190	MobiDBLite	consensus disorder prediction	1	42	-	-
Vra4g1262	190	Pfam	bZIP transcription factor	108	167	IPR004827	GO:0003700\|GO:0006355
Vra4g1262	190	PANTHER	TRANSCRIPTION FACTOR HY5-LIKE	22	190	-	-
Vra4g1262	190	CDD	bZIP_HY5-like	121	162	-	-
Vra4g1262	190	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	114	129	IPR004827	GO:0003700\|GO:0006355

Showing 1 to 10 of 14 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vra4g1262	Vra-Chr4	19550873	19555055	Dispersed

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vra4g1262	90	178	Basic region leucine zipper (bZIP) Transcription Factor Gene Family	AT3G17609	75.556	3.74e-41	134

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Vra4g1262		bZIP_1	3.6e-11	CL0018

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra4g1262	K16241		-	gmx:778143	293.123

Showing 1 to 1 of 1 entries