Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1249 ATGGAGTCTAAAGAAGCAGCAAGTGTTATTTTAAATTTGATGGGTCTTGATAAAGTGCCTAACCAACATCCTGTCAGAGATAAACAGAAAGTGCTCTCTGAGAATTACCAGCAGAAACTTGCTTCCATTGGTGTCAGAAGGAAGCGTTCATCTTATCAGCATCATTCCTTTGGAATGAATACTAGTGAAAAGGACAAATCTGAGGATGTTTTAGAAGTGTTCAAAGCACTCAGGAGAAGTAAGCATCATAACCCATCAAACGGAAATGGGAAAGAGAATCCCAGTTCTAGCAAAAATTCTCAGTTTGCTGATGGGCTGCCCCAAGAGATATGTTATCCTGAAAAGCAATATAGAAAGCAAATATCCTGTCACATGAATTTTGGTAAGCCAAGTTCAAGATCTTTCAGTAAAATTTCAGAGGAGATTTCTATGCAATCTGGAAATGTTGCAAATGGAGCTTTACATACTGCCTCAACTTCTTTTTTCAGAGGGAATGAAGTTCTTGCCAATGATATGCTGAAGCCTGCTTCAAATATTCCAGTTAATGAGATCCAATTCAATTCCCCAATCTTCTGTTCAGAAGCCAGGAGGAAAAGTTTGGAACAGAGGGATGTGACTGAAAAGGTTCATGAACTTAGACCATTTGGTCGAGACTGTACACATAACCAATTGCATATGATCTGGGAAAAAGGGAATGGAGCAAGAAATTTGACTCATCAAAGGCGATATGGTAATGTTAGAATTAAGGCTGGTGATAATTATAGCTTTGCTAGAAGAGTGCCGAGACCTCTTTGTTCAGCTTCAGGTCTTGCTGATAATTGTGGAACTATGAATCAGGATATCTTGTTTCATAGATATTGGGGTTTGAGAAAAAATTCATCCTCAAGTTGGTCATCATGGAACTCGAAGAATTCAAATAATGACCAGAAAGAATGTCTAGAAGATGAAAACCTCAGTTCTGGGGGTGAGAAATTTCCTTCCTTTTGCTCATATTTCAATAGTGATCATACTGAAGAGAATTGTATTAGTCACAAGTCAGAGAAGGGATGTTATGAGAACAATTTGTCTGATAAGATAACTATGCCTCATCAATTGCCAAGTTCTAGTTCTTCTCCCACCTTTATAGACAGACAGATCTTGCAAGAGAGAACAGTAATGAATGATGAAGTGAAGAACAGAAAGTATGACGACAGTAATTTGTTTCAGCAAAATGTTGAGTCTCTTGAGTCATCAGTTGAATTCTTGGCATCTGATGCAACAGTTGAGGTTGTTGACTGGACACATAGTCCAACCGAACATCAATCTAAATCAACAGCCTTCATTTTCTCACAAGAAATTGATTGTTTGAATCATACTTCATATACCTCAAAGCAACAGGATAGATCAGATTTTAAAGAAGGTTCTGATCATTCGCTTTGTCATGAGGTTCACCCAGATTCCCTTGGTAGCTCTGTCGAGTCATATGAACCAAGTCCAATTTCTGTTTTGGATCCCTTATTTAGAGAAGACATTCAATTCAGCTATAGAAGTGAAGACAATATATATGATTCATCTGAGGTGGATGATGAAGAATGTGATTTGAATGTTTCAAGTGATGAAGATTGTGAGAATGAATATGCACATAACTCTAAAGAAAAGAAAGAAATAGGAGGATTAGTTAGAGCTGAGGAAAGTAGGGATTTCTCATATGTTGTTGAGGTTTTAACAGAGGCGAGTATATTTAATAGGAACTTGCGTACAGACTTTTCTACATGGCACTCTTCACAATGTCCAATTAGTCCTTCTGTCTTTGAAAATCTGGAAAAGAAATTTGGCCAGCAACAGTTTTGGAGCAGATCTGAAAGGAAACTGCTATTTGATCGTATTAACATTGGCTTGATACAGATTCTTGAACCGTGTTTATTTGTTCCAATATGGGAAAAGTCAACATTAAGAAGATTGAATGTTGAACTAAGCCAGAACATAATTGAAGATGAGATGTGGGGGTTGCTTGCTGCACAAGAAAAGAAAGTGAGTAATGAGTTTGCAGATCATACACTTGAAGGGAAGATTAGATGGATAGAACTAGTTGAAGATGTTGAGGATATTGTTACAGAGATAGTTAATTTGGTAACAGAGGAGCTTGCTAACGAGATAGTTTTCTCTGTGAATTTTTGA 2157 0.3727 MESKEAASVILNLMGLDKVPNQHPVRDKQKVLSENYQQKLASIGVRRKRSSYQHHSFGMNTSEKDKSEDVLEVFKALRRSKHHNPSNGNGKENPSSSKNSQFADGLPQEICYPEKQYRKQISCHMNFGKPSSRSFSKISEEISMQSGNVANGALHTASTSFFRGNEVLANDMLKPASNIPVNEIQFNSPIFCSEARRKSLEQRDVTEKVHELRPFGRDCTHNQLHMIWEKGNGARNLTHQRRYGNVRIKAGDNYSFARRVPRPLCSASGLADNCGTMNQDILFHRYWGLRKNSSSSWSSWNSKNSNNDQKECLEDENLSSGGEKFPSFCSYFNSDHTEENCISHKSEKGCYENNLSDKITMPHQLPSSSSSPTFIDRQILQERTVMNDEVKNRKYDDSNLFQQNVESLESSVEFLASDATVEVVDWTHSPTEHQSKSTAFIFSQEIDCLNHTSYTSKQQDRSDFKEGSDHSLCHEVHPDSLGSSVESYEPSPISVLDPLFREDIQFSYRSEDNIYDSSEVDDEECDLNVSSDEDCENEYAHNSKEKKEIGGLVRAEESRDFSYVVEVLTEASIFNRNLRTDFSTWHSSQCPISPSVFENLEKKFGQQQFWSRSERKLLFDRINIGLIQILEPCLFVPIWEKSTLRRLNVELSQNIIEDEMWGLLAAQEKKVSNEFADHTLEGKIRWIELVEDVEDIVTEIVNLVTEELANEIVFSVNF* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1249 718 MobiDBLite consensus disorder prediction 87 103 - -
Vra4g1249 718 PANTHER DUF4378 DOMAIN PROTEIN 2 103 - -
Vra4g1249 718 PANTHER DUF4378 DOMAIN PROTEIN 86 715 - -
Vra4g1249 718 MobiDBLite consensus disorder prediction 78 103 - -
Vra4g1249 718 Pfam Domain of unknown function (DUF4378) 560 711 IPR025486 -
Vra4g1249 718 PANTHER AFADIN 86 715 - -
Vra4g1249 718 PANTHER AFADIN 2 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1249 Vra-Chr4 19437968 19443083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1249 473 713 TRM (TON1 Recruiting Motif) Superfamily AT2G39435 31.111 8.82e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1249 - - vun:114185209 1153.66