Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1227 ATGGCAGACAGTGTTGTTGGCTTCCTGGTGCAGAGGTTGTCACAACTACTTGAAAGCGAAATAAAGCTCCTTTCTGGTGTGGAAGAGAAAATAAAGTCCTTGCGTAATGAATTGAAGTTCATGGATATCTTCATCAAGAGCTCAGAGGGGAAGTACAAAGATGCAGTGGTGAAAGAAGTGGTGACGCAAATAAGAGATGTCGCCCACAAAGCAGAAGATGTGGTGGACACTTACATTCTCAACATCGCCAAACACAAACGTAGAAACAAATTGTGTCGATTATTCCACCTCAAAGAAAAACTCGTTGTGCCCCATGAAGTTGATGCTGAGATAGAGAAGATCAGGAGTCGTATCGATGAGATTTATAAAAACCAGGAGAGGTATGGCATCAAAGAAGGTGAATTCCAAAGCGAAGAAGCAGTTGCAATAGAATGGCGACGCAAAAGGAGGATGGATGTGGAGGAAGAAGATGTTGTGGGCTTAGTGAATGAGAGCGACACTGTCATTCAACAACTCCAGAAAGACGACGTGCGTCTTAATGTTGCTTCTATAGTCGGAATGGGAGGATTGGGTAAAACCACTCTTGCCCGTAAGATTTATAACAAGGACGTTGTGAAGAACATATTTCCTTGTCGTGCATGGGGTAATGTGTCTAACGATTACAGGCCCAAGGAGGTTTTTCAAAGTCTCCTGAGTTGCTTAAATCTTTCTGGATTTGAAAATTTAAGCGAGGAGAATCTGAAGAAAGAGGTAGCCAAAGGGTTGAAGGGGAAGAAATATTTGATAGTGCTTGATGACATATGGGAAACACGGGTATGGGATGACATAAAAGGAGCCTTTCCAGATGACAATACAGGTAGCAGAGTATTGATCACAAGTCGTGAAATGCATGTTGCACGCCATGCAGGAACCACTTCTCCGTACGAACTTCCTTTCCTCACCGAAGATAAAAGTTGGGAACTATTTTTTAAGAAGGTGTTTCGAGGTGAAAAATGCCCCTCCGAGTTAGAGCCTTTGGGTAGATCCATTGTCAAAGAAACTTGTGGGGGTTTACCACTTGCCATTGTGATCTTAGGTGGACTCTTTGCAAAGAAGGAGAAATCACAAAGAGAGTGGTCGAGAATGAAGAAAATGAGTTGGAATTCTACTGCAGACAAGAATGAAGTGATGGATATATTAAGGCTCAGTTACGACAACTTGCCTCCAACATTAAAGCCCTGTTTTCTTTATTTTGGAATCTATCCTGAAGACCACAAGATTAGTGCAAGAGAAGTGATCCAATTGTGGGGAGCAGAAGGGTTCGTACAACCACAAGAAAACGCAGAACCCGAAGAAGTAGGTGACTTTTACTTGGACGAGCTGGTGGATCGAAGCTTAGTGCAAGTGACTGAGAGGAGAACTGATGGAGGTGTTAAGATATGTCAGGTTCATGATGTTCTTCGTGATTTCTGCATATCAGAGAGCAAATTTTGCAAGTTTATGGATGTTTACAGAGAGTCCAATATTGACACCTTGAGTGATACCAATCCCCGTAGATTGTCCTTGCTATGCCAACCGCAATCTAGTATTTCTGTTATGACTTTTGACAAATCAATGTCAAGCACTCGTTCTGTGTTCGTTTTTACTGAGGCAAGTAAGTCTGTGGATGATTTGGTGAAAAGGTTCATGTTAGCTAGGGTTATTCATGGTTTTCAACCATCATTATTTCCCGACAATTTGAAGAGGATGATCCATTTAAGATACTTGAAAATATTATTTGTTGACAGTCTTCCAGCTTGTGTTGGCAACCTATGGAATTTAGAAACACTAGATGTAAGTTACAAAAAGAGAGTTTCCAGTAAAATTTGGAAGCTGAAACGATTGAGACGTCTTTGCTTGAGAGGGAGAGGGAAGTTACCAGTCTTGCCTAAAGGAACTAGAATGGAGAATCTACAAAGCCTTTGGTTGTACGGTTGGAGTTCAGAAATTAAGTCCCTGGTCGACAATGGCATATTTCCTAGGTTGGTAAAATTAGCTTTGTCACCTATGACTTTATTAAGAATTGATGAGGATGAGGAAGTAGATTTTCTATCAGGTGTACAATGCCTAAATCATCTTGGTAGTCTAAAAATAGATGAAATTGGAAATCTTCCATCAGACAATAATGTGTTTCCATCAAAGATTACCAAGATAACCTTTAAACAAATATTAAGTTGGTCTTTCATGAAGACCCTAGGTCAACTTCCTAACCTTCAAATTTTGAAACTAGAATATGAAAGTGGTATACTGCGGAATCTTGATATTGGCAAGGGAGAGTTCTGTCAACTTCAAGTGTTTCATATAAAGTTCTTAAGTATAAAGTCATGGAGATTAGAGGAAAGTGCAATGCCCCGTCTTCGACATCTGCGTATTATAAATTGTTATTATTTGTTTCAACTTCCCCAGCAACTTTGGTCATTGAGAACCTTGCAACTTGTGCATATTGTGAGACCCTCCCAAGAATTGACTAGCAACCTCCAAATTGTGGAGTTCAAGAACAATTGTAAACTCGTATTGGAAGATATGTGGTAA 2550 0.4027 MADSVVGFLVQRLSQLLESEIKLLSGVEEKIKSLRNELKFMDIFIKSSEGKYKDAVVKEVVTQIRDVAHKAEDVVDTYILNIAKHKRRNKLCRLFHLKEKLVVPHEVDAEIEKIRSRIDEIYKNQERYGIKEGEFQSEEAVAIEWRRKRRMDVEEEDVVGLVNESDTVIQQLQKDDVRLNVASIVGMGGLGKTTLARKIYNKDVVKNIFPCRAWGNVSNDYRPKEVFQSLLSCLNLSGFENLSEENLKKEVAKGLKGKKYLIVLDDIWETRVWDDIKGAFPDDNTGSRVLITSREMHVARHAGTTSPYELPFLTEDKSWELFFKKVFRGEKCPSELEPLGRSIVKETCGGLPLAIVILGGLFAKKEKSQREWSRMKKMSWNSTADKNEVMDILRLSYDNLPPTLKPCFLYFGIYPEDHKISAREVIQLWGAEGFVQPQENAEPEEVGDFYLDELVDRSLVQVTERRTDGGVKICQVHDVLRDFCISESKFCKFMDVYRESNIDTLSDTNPRRLSLLCQPQSSISVMTFDKSMSSTRSVFVFTEASKSVDDLVKRFMLARVIHGFQPSLFPDNLKRMIHLRYLKILFVDSLPACVGNLWNLETLDVSYKKRVSSKIWKLKRLRRLCLRGRGKLPVLPKGTRMENLQSLWLYGWSSEIKSLVDNGIFPRLVKLALSPMTLLRIDEDEEVDFLSGVQCLNHLGSLKIDEIGNLPSDNNVFPSKITKITFKQILSWSFMKTLGQLPNLQILKLEYESGILRNLDIGKGEFCQLQVFHIKFLSIKSWRLEESAMPRLRHLRIINCYYLFQLPQQLWSLRTLQLVHIVRPSQELTSNLQIVEFKNNCKLVLEDMW* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1227 849 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 411 IPR027417 -
Vra4g1227 849 Coils Coil 17 37 - -
Vra4g1227 849 Pfam Rx N-terminal domain 5 90 IPR041118 -
Vra4g1227 849 Gene3D - 403 486 IPR036388 -
Vra4g1227 849 CDD RX-CC_like 2 121 IPR038005 -
Vra4g1227 849 PANTHER - 37 844 - -
Vra4g1227 849 Gene3D Ribonuclease Inhibitor 560 843 IPR032675 -
Vra4g1227 849 PANTHER DISEASE RESISTANCE PROTEIN RP 37 844 IPR044974 GO:0006952
Vra4g1227 849 SUPERFAMILY L domain-like 468 820 - -
Vra4g1227 849 Gene3D - 312 401 IPR042197 -
Vra4g1227 849 PRINTS Disease resistance protein signature 181 196 - -
Vra4g1227 849 PRINTS Disease resistance protein signature 254 268 - -
Vra4g1227 849 PRINTS Disease resistance protein signature 348 362 - -
Vra4g1227 849 PRINTS Disease resistance protein signature 595 611 - -
Vra4g1227 849 Gene3D - 144 306 IPR027417 -
Vra4g1227 849 Pfam NB-ARC domain 166 399 IPR002182 GO:0043531
Vra4g1227 849 Gene3D - 5 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1227 Vra-Chr4 19269565 19273720 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1227 159 482 WRKY Transcription Factor Family AT5G45050 23.373 3.84e-11 65.1