Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1222 ATGACCATGGTTCCTTCTCAAAACGGGAAACATCAGAACATTAATAGGAGTGGTGATTATGTTATTTACGGTAACACGACAACGAGTACTGCTATGAACCAGGTCATTGAAGTTGAAGGAGGCTACAATTGCTTACTAGGATCTGATTTTGTGGTGAGGAGGCACATCATGGCCGAGGCGGAAGAATCCTCCAGACACAACACCAACGAGGAAGCTGAACCCGGTGGCTGTGGTTCAACCTCAAAGGATGAAGAAGTAGAAGGAGGAAACATCAACACCAACACCAACAACAATAATAACAATAACTGGCTTCAATTAGGCATAGGTTTGACAAGCACAAAGGAAGAACTTGATCGAACCGTTCCAACAACAATCGCCTCAGGGCCTGTGGAGTTAGACTTGCTGCCCTCACGGCGGAGGTTCGATCAACCGCCGGCGTTTTTTCCGGTGGTGACTTCTGGGAGAGGAGGAGGGTCTAGTTTTGGTGGTTCTTCTTCTTTGGTTTTTGAGCATCAAACGACGTCGCCTTCTTCCATATCCATGTCCATGGCTAGTGGTCCAATTACCTCAACCTTTGGTCATCAAGAGATGATGAACTGGGCATTTGGTCCACTACTTCCTCCTTCTATGCCTATTATGCCCTCTTCTTCCTCTTTCACTCCTCTTCCACCTCCTCCTTCTTCTTCTTCTTCTTCCTCATCACAAACATGTCACTCCACTTTCAGGCCTCCCTTAGGATCCTACTTTCCCACACCCTTTCATCACTTTCCTTCTTCTTCTTCTTCTGGATTTGATCAATATGACGTGGCTGGGGCAGGACCAAGCTCCGATGTCACCGTTCGAGTTGTTGATCCTCCCAGAAGACCTCATTCTGGAATATGGTTCATGTTACAAGCCTCTCAAAATCAAGCGAAAGAACCATTCTTGCCACAAATACCTAAGAACTACCTTAGAATTAAAGACGGAAGGATGACAGTTCGGTTGCTATTGAAGTATCTGGTTAGCAAACTCAGACTGGAAAGCGAATCAGAGATAGAGATAACATGCAGAGGACAGCAACTTTTACCTTTCTTGACGTTGCAGCATGTGAGGGATAACATATGGAGTCCCAGAGACACCACAACATCTTTGCTTTCAGATTCCTCAACCTCGGATCATGTCATGGTGCTCCATTATGGTAGAACCACTGCTTAA 1194 0.4573 MTMVPSQNGKHQNINRSGDYVIYGNTTTSTAMNQVIEVEGGYNCLLGSDFVVRRHIMAEAEESSRHNTNEEAEPGGCGSTSKDEEVEGGNINTNTNNNNNNNWLQLGIGLTSTKEELDRTVPTTIASGPVELDLLPSRRRFDQPPAFFPVVTSGRGGGSSFGGSSSLVFEHQTTSPSSISMSMASGPITSTFGHQEMMNWAFGPLLPPSMPIMPSSSSFTPLPPPPSSSSSSSSQTCHSTFRPPLGSYFPTPFHHFPSSSSSGFDQYDVAGAGPSSDVTVRVVDPPRRPHSGIWFMLQASQNQAKEPFLPQIPKNYLRIKDGRMTVRLLLKYLVSKLRLESESEIEITCRGQQLLPFLTLQHVRDNIWSPRDTTTSLLSDSSTSDHVMVLHYGRTTA* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1222 397 MobiDBLite consensus disorder prediction 61 100 - -
Vra4g1222 397 Gene3D - 287 392 - -
Vra4g1222 397 MobiDBLite consensus disorder prediction 85 100 - -
Vra4g1222 397 PANTHER RING FINGER PROTEIN 1 395 - -
Vra4g1222 397 PANTHER RING FINGER PROTEIN 1 395 IPR044171 GO:0007275
Vra4g1222 397 MobiDBLite consensus disorder prediction 214 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1222 Vra-Chr4 19171172 19179956 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1222 306 393 C3H Transcription Factor Family AT3G23060 38.043 1.33e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1222 - - gmx:102664960 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g1222 4 19171172 19179956 Vra4g1222 4 19171172 19179956 ECH