Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1206 ATGGCAGCCATGGGAGGTTCCGGTAGCAGTCACCGGTTGGGGAGAGCTTCGTTGGTTGGGAAGTACCTTGAGGTTTTGGCCAAGGGGAAGACATCTGATGCAATTGCTAAGCTCATGAACTTGACACCTGATACTGCTATATTGTTGACGTTGGATAGTGAAGGAAATGTTGTTGGTGAGGAGGAAATTGATAGCAGGTTGATTCAGAAGAATGATGTTATTAAGATCATTCCCAGTGCAAAAGTGGCTTCCGATGGATTGGTCATTTGGGGTCAGAGCCACGTGAATGAGAGCATGATAACAGGTGAGGCACGTCCTGTGGCAAAGAGGAAAGGGGATACTGTTATTGGAGGAACTATGAATGAAAATGGAGTGGCATGCACGAGACAATTATAA 396 0.4596 MAAMGGSGSSHRLGRASLVGKYLEVLAKGKTSDAIAKLMNLTPDTAILLTLDSEGNVVGEEEIDSRLIQKNDVIKIIPSAKVASDGLVIWGQSHVNESMITGEARPVAKRKGDTVIGGTMNENGVACTRQL* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1206 131 Gene3D - 27 129 - -
Vra4g1206 131 SUPERFAMILY Calcium ATPase, transduction domain A 60 127 IPR008250 -
Vra4g1206 131 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 17 126 - -
Vra4g1206 131 PANTHER ATP7, ISOFORM B 17 126 - -
Vra4g1206 131 Pfam E1-E2 ATPase 59 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1206 Vra-Chr4 19043801 19044496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1206 18 125 Primary Pumps ATPases AT1G63440 87.963 1.69e-60 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1206 K17686 - vra:111241794 242.276