Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1204 ATGGATGCGCGTAGAGCTCCACGCGCCGTTATTGATCCTAAGGTCCGCAGAGTTGGGTTCTTCGCCCCGCCCGACCGCTCTCAATCGGGTCCACCACACCCGATCTCACTTGATGTCTCTCCTGCAGCCAACTCCCTCTCGCCGGTCATGATCCCACCGCCGCGCCATTTGTCGGAGAATCTCAGCCTCCACGGCCGTCCTGCTCCGACTTCTCCATCCGTTGAGGAATCTGTCACTGCCGGGAGCTATTCTAGCTCGTCGGAGTTCTTTCCCCCTATGTCTCCAGCACCGTCCTCTTACACGAACAGGATGGTTGTCGACGACAGAGACTTCTTTGACGGCAGTAAGATGACATCTTCGTCTCCACACGGAGGGGTTGACTTGACTGCGACGAAGGCCAGTAGCGTCTTGGTCAGCGAATTAACCACGGTTGCGGTGGTGAATGCTGATTCCCTTGCAATTGGCGAGAGAGAGAGAGCAGACAGGGGAGGAGGATCGACCATGGAAATGAAAGACCAAGCTCTGAATACTAAACCGAAGAAAGAAAAGACCTCAAAAGCTGAAAGACGAGCTCTTCAAGAAGCTCAACGAGCTGCTAAGGCTGCTGCAAAAGCTGAAGGAAATAAGGCATCTGGAACTCTGGCTTCAGTTAATGTAAAACCAGCTAAAGCTGCAAAGCCCCCACAAAAAGTTGATAATGCTTCAGTTGCAGCCTCTGATAAGAAAGGGGTTGATCGTTCACAAGAAAAAGATAGAAAGAAAGATGTTCCTCAACCGCGGATGCAATATGATGATAAGAGCAGAGTGGAGAAAGCCAAAAGACGTGCTGTGGTAAAACAAACTGAAGCTAAGAACAGAGTTGAACTATTCAGGCATTTGCCACAGTATGAACATGGGAGTCAGCTACCAGATCTTGAGGCAAAGTTTTTCCACCTTGGCCCTGTGCATCCTGCTGTTTATAAGGTAGGTTTGCAGTATCTATCTGGAGATATAACTGGTGGCAATGCTCGTTGTATTGCTATGCTTCGAGCATTTCAAGAGGCCATTAAAGACTACGGGGTTCCACCCGAGAAGACTCTGGTGAGAGACTTAACAGCAAGATTGAGTAGTTATGTTTCTTTTCTCATTGAGTGTCGACCACTTTCTATCAGTATGGGCAATGCAATTAGGTTTCTCAAAAGTCGAATTGCCAAGCTACCTTTGACGATGTCCGAGTCAGAATCAAAAACCTCTCTTCAATCAGATGTTGAGCGTTTCATAAATGAGAAAATTCTACTTGCCGATAAGGTGATAGTCAAGCATGCTATCACAAAAATAAGAGACGGTGATGTTCTTCTTACTTATGGGTCTTCATCGGCAGTTGAAATGGTACTGTTACATGCACATGAGTTAGGTAAACAGTTTCGAGTTATAGTGGTAGACTCTCGTCCAAGACTTAGAGGGAAACTTTTGCTTCGTAGGCTTGTGGAGAAGGGTCTTAGCTGTACATACACTCATATTAATGCTGTTTCCTATATAATGAAGGAAGTTACTCGAGTATTTCTGGGTGCTTCATCAGTGTTGTCTAATGGGACAGTTTATTCAGCAGTTGGGACTGCTTGTGTTGCAATGGTTGCCCATGCATTTCGTGTCCCTGTTTTAGTATGCTGTGAGGCTTATAAATTTCATGAAAGGGTGCAGCATGATTCCATATGCTCAAATGAGCTTGGTGATCCAGACATCATTTCTAGGGTTCAGAGTAGAGAGGATGTGAACCACTTGGAAGGTTGGGCCCATACTGAAAATCTGCAACTTCTAAATCTGATCTATGATGCAACACCTTCAGATTACGTTTCCATGATAATCACAGATTATGGCATGGTCCCACCCACAAGTGTACCTGCAATTGTAAGGGAATATAGCAGGGAACAGGTGTGGATATGA 1923 0.4607 MDARRAPRAVIDPKVRRVGFFAPPDRSQSGPPHPISLDVSPAANSLSPVMIPPPRHLSENLSLHGRPAPTSPSVEESVTAGSYSSSSEFFPPMSPAPSSYTNRMVVDDRDFFDGSKMTSSSPHGGVDLTATKASSVLVSELTTVAVVNADSLAIGERERADRGGGSTMEMKDQALNTKPKKEKTSKAERRALQEAQRAAKAAAKAEGNKASGTLASVNVKPAKAAKPPQKVDNASVAASDKKGVDRSQEKDRKKDVPQPRMQYDDKSRVEKAKRRAVVKQTEAKNRVELFRHLPQYEHGSQLPDLEAKFFHLGPVHPAVYKVGLQYLSGDITGGNARCIAMLRAFQEAIKDYGVPPEKTLVRDLTARLSSYVSFLIECRPLSISMGNAIRFLKSRIAKLPLTMSESESKTSLQSDVERFINEKILLADKVIVKHAITKIRDGDVLLTYGSSSAVEMVLLHAHELGKQFRVIVVDSRPRLRGKLLLRRLVEKGLSCTYTHINAVSYIMKEVTRVFLGASSVLSNGTVYSAVGTACVAMVAHAFRVPVLVCCEAYKFHERVQHDSICSNELGDPDIISRVQSREDVNHLEGWAHTENLQLLNLIYDATPSDYVSMIITDYGMVPPTSVPAIVREYSREQVWI* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1204 640 MobiDBLite consensus disorder prediction 64 101 - -
Vra4g1204 640 MobiDBLite consensus disorder prediction 157 278 - -
Vra4g1204 640 Gene3D - 427 633 IPR042529 -
Vra4g1204 640 MobiDBLite consensus disorder prediction 174 195 - -
Vra4g1204 640 MobiDBLite consensus disorder prediction 242 278 - -
Vra4g1204 640 MobiDBLite consensus disorder prediction 20 101 - -
Vra4g1204 640 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 3 640 - -
Vra4g1204 640 PANTHER TRANSLATION INITIATION FACTOR EIF-2B DELTA SUBUNIT 3 640 - -
Vra4g1204 640 SUPERFAMILY NagB/RpiA/CoA transferase-like 315 633 IPR037171 -
Vra4g1204 640 Pfam Initiation factor 2 subunit family 331 623 IPR000649 GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1204 Vra-Chr4 19017373 19023599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1204 1 640 Eukaryotic Initiation Factors Gene Family AT5G38640 65.152 0.0 777
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1204 K03680 - gmx:100785938 1012.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g1204 4 19017373 19023599 Vra4g1204 4 19017373 19023599 ECH
Vra4g1204 4 19017373 19023599 Vra1g1201 1 16107255 16116619 ECH