Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1148 ATGTTTCTGAAATGTTTTGGTGAGTCAAGTTCATCCGGAAGACAATATCCAACAGTAATAGAAGAGTTGTGTCGTCATTTTTCTCTTGCTGATATTCAGAAATCAACCAACAATTTTGATCATAAGAGACTAATTGCACGAGGAGCATGGGTTAAAGTATACAAAGGTTGTCTCCAGCATATTGATGGTTCTGATTACGCGGTGGCAGTGAGGCGATTTAAGGAGGAGGAGAGTGAAACATTCAAAAGAGAAGTAGAGTTACTGTGTCAGCTTCATCACCCAAATTGTGTGTCTATTGTAGGATTTTGCAACCACGAAAAAGAGAAGATCATTGTGCATGAATACTTGTCCAATGGATCTCTAGATCGATACCTGGTAGATGATAAGGTTAGGGAAGCACTGCCATGGAAAAAAAGGATAGAGATTTGCATAGGATCAGCACGTGGACTACACTACCTTCATGCCGGACTCAAACGCACCATCATTCACCGCAACATCAATTCTGCCAGCATTCTTTTGGATGACAACATGCACCCAAAACTCTCAAGTTTCGGCCTTAGCATAATGGGAGCACATTTCAAAGAAAAGTCAAAACCAATACAAACGGATATTGTAGGTCATGCTGCCCACTTACCTCCGGAGTACATAAAGGACGGTACTGTCACACATAAATGTGATGTTTACGCATTTGGTGTTGTTCTGCTACAAGTTGTAGTGAGGGGAACAAGTATTTTTCCAATGCTAGAAGAACTTATGGGGAAGTGTGTTGAGGAGAATATTGATCCGAAAATCAAAGGAAAGATTGCACCAGAGTGTTGGCAAGTGTTTATAGACATAGCCTTGAGATGCATGAAGGATGAACCTGAGGAACGACCAGAAATGGGTGAAGTGGAGGTGCAACTTGAGTTTGCTCTGTTGTTGCAGGAACAAGCAGATGTCACAAACATCAATAGTTATTATACCTTATCGTCCAAAACCATTATTACCCGAAAATGCGAGTGGAGGTGGGGATTTGACGATGTGGCTAATAAGTTTTTTAAGTATAGTCAGGTTTAA 1056 0.4091 MFLKCFGESSSSGRQYPTVIEELCRHFSLADIQKSTNNFDHKRLIARGAWVKVYKGCLQHIDGSDYAVAVRRFKEEESETFKREVELLCQLHHPNCVSIVGFCNHEKEKIIVHEYLSNGSLDRYLVDDKVREALPWKKRIEICIGSARGLHYLHAGLKRTIIHRNINSASILLDDNMHPKLSSFGLSIMGAHFKEKSKPIQTDIVGHAAHLPPEYIKDGTVTHKCDVYAFGVVLLQVVVRGTSIFPMLEELMGKCVEENIDPKIKGKIAPECWQVFIDIALRCMKDEPEERPEMGEVEVQLEFALLLQEQADVTNINSYYTLSSKTIITRKCEWRWGFDDVANKFFKYSQV* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1148 351 Pfam Protein tyrosine and serine/threonine kinase 42 300 IPR001245 GO:0004672|GO:0006468
Vra4g1148 351 PANTHER OS07G0166700 PROTEIN 10 323 IPR045272 GO:0004714|GO:0006468
Vra4g1148 351 Gene3D Phosphorylase Kinase; domain 1 7 115 - -
Vra4g1148 351 PANTHER TYROSINE KINASE FAMILY PROTEIN 10 323 - -
Vra4g1148 351 Gene3D Transferase(Phosphotransferase) domain 1 116 323 - -
Vra4g1148 351 ProSiteProfiles Protein kinase domain profile. 39 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra4g1148 351 SUPERFAMILY Protein kinase-like (PK-like) 14 308 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1148 Vra-Chr4 18544143 18545554 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1148 8 312 Receptor kinase-like Gene Family AT3G51550 39.375 3.55e-73 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vra4g1148 PK_Tyr_Ser-Thr 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1148 - - var:108327132 537.339