Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1133 ATGAGGCTTGTCATATCAGCTGCATGTGTTCTAGTGCTATTCTCTTGTGCAGCTGCGTATGATCCTTTGGATCCAAATGGGAACGTAACGATCAAATGGGATGTTGTGTCTTGGACACCAGATGGTTATGTAGCAGTGGTAACGATGAGCAATTTCCAAATGTTTCGGCACATCATGAATCCGGGATGGACCTTGTCGTGGACGTGGGCAAAGAAGGAAGTAATATGGTCCATGGTAGGAGCTCAAACAACAGAGCAAGGAGACTGCTCTAAGTTCAAAGGCAATGTGCCTCACTGCTGCAAGAAAACTCCCACAGTTGTAGACTTGCTCCCTGGTGTACCTTACAATCAACAATTCTCAAATTGTTGTAAGGGTGGAGTGGTGGCAGCATGGGGCCAAGACCCTTCAGCAGCAGTTTCATCCTTCCAAGTCAGTATTGGGTTAGCTGGCACTTCAAACAAGACTGTTAAACTTCCCAAGAACTTCACTCTCTTGGGTCCAGGACCAGGCTACACTTGTGGTCCTGCCAAGGTTGTTCCTTCCACCGTTTTCCTTACACCTGACAAGCGCCGCAAGACTCAAGCACTAATGACATGGAATGTTACTTGCACATACTCACAATTTCTTGCAAGAAAGAACCCAGGTTGCTGTGTATCTTTGTCATCCTTTTACAACGAGACCATTACCCCTTGTCCCTCTTGTGCATGTGGATGCCAGAACAGGAGGAACTGTGTCAAGAGTGACTCTAAACGTATCAACATGGTGGGGATTCACACTCCAAAGAAAGACAATGAACCATTGCTACAGTGCACTCATCATATGTGCCCAATAAGAGTACACTGGCACGTGAAGCTCAACTACAAGGACTATTGGAGAGTCAAGGTTGCCGTAACAAATTTCAACTACAGAATGAACTACTCCCTCTGGACTCTTGCTGTTCAGCATCCAAATCTTAACAATGTCACCCAAGTTTTCAGCTTTGATTACAAGCCTCTACTTCCATACGAGTCCATAAATGATACTGGTATGTTCTTTGGAATGAAATACTTTAACGATCTATTGATGGAAGCTGGACCGACTGGGAATGTTCAATCAGAAATTCTTCTTCAGAAAGATAAGGATACATTCACACTCAAGCAGGGGTGGGCATTTCCTCGCAAGGTCTACTTTAATGGCGAAGAATGCATGCTGCCACCGCCGGATACTTACCCGATCCTTCCTAACTCTGCCCCGTTGAACCTATTCATCTTCCCAGAATTCATATTCACAATGCTTGTCATGCTAGCTGTTTTGTGA 1296 0.4506 MRLVISAACVLVLFSCAAAYDPLDPNGNVTIKWDVVSWTPDGYVAVVTMSNFQMFRHIMNPGWTLSWTWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSAAVSSFQVSIGLAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTVFLTPDKRRKTQALMTWNVTCTYSQFLARKNPGCCVSLSSFYNETITPCPSCACGCQNRRNCVKSDSKRINMVGIHTPKKDNEPLLQCTHHMCPIRVHWHVKLNYKDYWRVKVAVTNFNYRMNYSLWTLAVQHPNLNNVTQVFSFDYKPLLPYESINDTGMFFGMKYFNDLLMEAGPTGNVQSEILLQKDKDTFTLKQGWAFPRKVYFNGEECMLPPPDTYPILPNSAPLNLFIFPEFIFTMLVMLAVL* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1133 431 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Vra4g1133 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0031225
Vra4g1133 431 PANTHER PROTEIN COBRA 4 429 IPR006918 GO:0010215|GO:0031225
Vra4g1133 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0031225
Vra4g1133 431 PANTHER COBRA-LIKE PROTEIN 4 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1133 Vra-Chr4 18421992 18424472 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1133 1 431 COBRA Gene Family AT3G29810 63.182 0.0 607