Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1132 ATGGGTTTTTCTCTGTTACCAAAAGCAACTCCTTGCATATTGCTCTGGGCTCTGCTGTATTGTACTTCCTTCACTTCAACAGATGCTTATGATCCGCTTGACCCAAATGGGAATATCACAATCAAATGGGATATTATAAGTTGGACCCCTGATGGATATGTAGCTGTTGTTACAATGAACAATTTCCAACAATATCGTCATATTGCTTCACCTGGCTGGTCACTAGGATGGACATGGGCAAAAAAGGAGGTAATATGGAGCATGATGGGAGGGCAGACCACTGAACAAGGAGATTGTTCAAAATTTAAGGGAGGTATTCCACATTGTTGTAAGAAGGATCCGACCGTTGTGGATTTGCTTCCTGGAACACCTTACAATCAACAAATTGCAAATTGCTGCAAAGGTGGGGTACTCAGTTCTTGGGTGCAGGATCCTACCAATGCAGTTGCATCATTTCAAGTTAGTGTTGGTAGAGCTGGTACCACAAACAAAACTGTCAAAGTCCCAAAAAACTTTACCCTGCATGCACCAGGACCAGGTTATACTTGTGGTCCAGCCAAGATTGTGAGACCCACCCAATTCATCCAAGCAGACAAAAGGAGAGTGACCCAAGCACTGATGACATGGAATGTGACATGCACATACTCACAATTTCTAGCTCAGAAAACTCCCTCTTGCTGTGTCTCACTTTCATCTTTCTATAATGATACTATTGTGCCGTGCCCAACATGTGCATGTGGTTGCCAGGGTAACTCATCTCTGTCAGGAAGCTGTGTGAATCCAAATACCCCACATTTGGCATCGGTTGTTTCTGGCTCTGGGAAGAATAACTTTTCACCTTTGGTTCAGTGTACAAGTCATATGTGTCCAGTCCGAATCCACTGGCATGTTAAGCTAAACTACAAGGAGTACTGGCGTGTAAAGGTTACTATAACTAATTTTAATTACAGGATGAACTATTCTGAGTGGAACATGGTTGTTCAACATCCAAACTTTGACAATTTGACTCAACTATTCAGTTTCAACTACAAGTCATTGACCCCTTACGGTACAATAAATGATACAGCAATGCTATGGGGAGTGAAGTTCTATAATGATTTTCTCAACCAAGCTGGCCCTAATGGCAATGTTCAATCCGAGCTACTCTTCCGAAAGGATAAAGCAACTTTTACTTTTGATAAGGGATGGGCTTTTCCTCGAAGGATCTACTTCAACGGTGACAACTGTGTCATGCCACCACCTGATGCTTATCCGTGGTTACCTAATGCTGGTTCTCGGCAAGAGGTTTCCTTGTTTGCCTTAGTGATAGCTTCTTTGGTAGCCTTGGTCTTTTATGCTCACGCATAA 1347 0.4269 MGFSLLPKATPCILLWALLYCTSFTSTDAYDPLDPNGNITIKWDIISWTPDGYVAVVTMNNFQQYRHIASPGWSLGWTWAKKEVIWSMMGGQTTEQGDCSKFKGGIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSWVQDPTNAVASFQVSVGRAGTTNKTVKVPKNFTLHAPGPGYTCGPAKIVRPTQFIQADKRRVTQALMTWNVTCTYSQFLAQKTPSCCVSLSSFYNDTIVPCPTCACGCQGNSSLSGSCVNPNTPHLASVVSGSGKNNFSPLVQCTSHMCPVRIHWHVKLNYKEYWRVKVTITNFNYRMNYSEWNMVVQHPNFDNLTQLFSFNYKSLTPYGTINDTAMLWGVKFYNDFLNQAGPNGNVQSELLFRKDKATFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAGSRQEVSLFALVIASLVALVFYAHA* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1132 448 Pfam COBRA-like protein 53 216 IPR006918 GO:0010215|GO:0031225
Vra4g1132 448 PIRSF COBRA 3 448 IPR006918 GO:0010215|GO:0031225
Vra4g1132 448 PANTHER COBRA-LIKE PROTEIN 7 447 - -
Vra4g1132 448 PANTHER PROTEIN COBRA 7 447 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1132 Vra-Chr4 18418274 18422002 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1132 18 443 COBRA Gene Family AT3G02210 75.701 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1132 - - gmx:100783820 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g1132 4 18418274 18422002 Vra4g1132 4 18418274 18422002 ECH