Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1128 ATGGCTGACACAGTGAAGGTGATAGAACAGTGTGAAGTTAGTCCTCCACCAGGTTCTGTTCCTTGGACCTCTATCCCTCTTACTTTCTTCGATCTTCCATGGCTTTGTTGTCCACCTCTCAAACGTATCTTCTTCTTTAACTTCCCTTATTCCACCCAACACTTCCTCCAAACTCTCCTTCCAACTCTCAAGAACTCTCTTTCCCTCACTCTCCAACACTTCTTCCCTTTCTCTTCCAACCTTCTCTTCCCTCCAAAGCCAAACCCACCTCACATCCTCTACACACAATCTAATTCTCTCTCCTTCAGAGTAGCTGAGTCCTCAGCAGATTTCACCACCTTTGTCTCTGATTCCCCAAAAGATGTCACAGCTTTGCACCCTTTTGTTCCTGTCTTGGCCCCACCACACACCTTAGAAGATGGCACCTTTTTGCTCCCTCTCATGTCCATTCAGGTCACTGTTATGCCCCATTCTGGCTTCGCCATATGCATCACTTTCAGACACGTGGCTGCTGATGGAAAATCTTTTCATCACTTCATGAAATTCTGGGCCTCTGTTTGTAAGTCCAATGGAGACTTGACTTTGGCTTCCCTTGCTATACCATTGCACAATAGGGATATCATTCAAGACCCTAAAGGTCTTAAGCACATTTTCTTGCAGGAACTGTTGAACTTTTTACCGGAGAATGTAGAGTCCAAGGGCGAAATACGTGATGTTCCTACTGACATGGTGCGTCACACGTTTGTCTTGAGTCATGATCATGTTGAGAAACTCAAGAAATGGGTCTCTATTAAATGCAAAAGCCATGGTCTAGAACTACCACACATAACAACCTTTGTGGTGACATGTTCTTTGATTTGGTTTTGTAAGGTGAAATCAGAAGAGATTAAAGCTGGTACTGTACTTTTCAATGATGATGAGTCCTACATCTTGGCCTTTATGGCAGATTGTCGTAATCGTCCTGAATTTTCAATTCCATTGGAATACTTTGGAAATTGTTTGGTTTGTGGCAATGCTGAAGTCAAGAGGAGCAAGCTTGTTGGAGGAAATGGTATTTTGGAGGCAGCCATTGCTATTGGTAGTCAGGTTAGACATTTGCAACGAGGAACATTTGAAGGGGCTGAAACATTGATGTCAAATTTTACTGAATTTGCCACGTTGGGGAAGCACATGACAATAATTGCAGGGTTTCCAAGTCTTAAAGTGTATGAAACTGACTTCGGGTGGGGAAAGCCCGAGAAGAGTGAAGTGGTTCATGTAGATAATTCAGGATCAATTTCCCTTTCTGACTGTAGAGACAAAGAAGGTCGAATTGAAGTAGGGTTAGCACTTCAAAAGAGTCAAATGAAGAAATTCAGTACCATTTTTGAAGAGCATCTCGCAGAAATTAGCGTTCTTGACTGA 1404 0.4288 MADTVKVIEQCEVSPPPGSVPWTSIPLTFFDLPWLCCPPLKRIFFFNFPYSTQHFLQTLLPTLKNSLSLTLQHFFPFSSNLLFPPKPNPPHILYTQSNSLSFRVAESSADFTTFVSDSPKDVTALHPFVPVLAPPHTLEDGTFLLPLMSIQVTVMPHSGFAICITFRHVAADGKSFHHFMKFWASVCKSNGDLTLASLAIPLHNRDIIQDPKGLKHIFLQELLNFLPENVESKGEIRDVPTDMVRHTFVLSHDHVEKLKKWVSIKCKSHGLELPHITTFVVTCSLIWFCKVKSEEIKAGTVLFNDDESYILAFMADCRNRPEFSIPLEYFGNCLVCGNAEVKRSKLVGGNGILEAAIAIGSQVRHLQRGTFEGAETLMSNFTEFATLGKHMTIIAGFPSLKVYETDFGWGKPEKSEVVHVDNSGSISLSDCRDKEGRIEVGLALQKSQMKKFSTIFEEHLAEISVLD* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1128 467 Gene3D - 239 462 IPR023213 -
Vra4g1128 467 Pfam Transferase family 21 458 - -
Vra4g1128 467 PANTHER - 3 465 - -
Vra4g1128 467 Gene3D - 4 233 IPR023213 -
Vra4g1128 467 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 3 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1128 Vra-Chr4 18396743 18398519 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1128 45 463 Monolignol Biosynthesis Gene Families AT5G48930 22.477 1.07e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1128 - - gmx:100782335 822.772