Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1112 ATGTCTGGAAAGTCTTTGAAATCCTTGAAGGATGAAAACCCAGATTTGCAGAAGCAAATTGGGTGCATCACTGGATTTTTTCAGCTCTTTGACCGCCACCGTTTCCTCACAGGCCAACGCTCCGGCACCTGCATTCAGCACAGCCCAACTTCAGGAGCAAGCAGTTATGAAATTAATGAGCTCAACGGTACAATGCTGAAAACTAAGGCAAAGAATCTCAAGGATGCTAGAGAAAAGCAACAATTCTCCACAGAATCATCTATAACTTCTTTATCTTCATCCTCTTGTTCATCTAGCATGTCATCCCTTGAGTTTAACAGAACCATTCAGATGCAATCATCATCAAGAAATCAGACAAAAATTCCTGAAAATACAAATTCAAAAGTAGCAAAGAAACAACTTGATACCTCGCGCCATCAATCCCTCCATTTCAACCATATTGTCAAAGACTCGATGCATAAAGAAGCTCAAGGATTGTCTGTGAGAACTGTGGCTGAAGAGGAAAAGAAGGGTCACACTAATACCTTGAAACTCATAGACTCTCCCCGGCCTCTGCGGTCACAGAAATCTGTCAATGCAGGAGTTACAGTTGCCGGCGAACCATTCCATACTCTTGCCAAGTCCAAGAAAACACCTTGGGACTCACCACGGCTCTCTTATGATGAAACATTCAAATCTGCCACAAAGCATAAGGAATTCCCAAGGCTTTCCTTGGACAGCAGAGAAGGGTCCAATGAAGGAAACAAGTCTCGCAACCTGTTGAAGGGTCAGCAGAAAGGTTATGCAAAGAGCTCTAGCACAATGATTAACCAACTGCAAGAACCAGAATCTTCCAAAAGATCTTCCAGTGTTGTAGCAAAGTTGATGGGACTTGAAGCCCTGCCGATTGGAACTTCTAGTTGCTCTAGCACAAGTGATGAAGATAAGCACCACCAAAAATTCGCCTTGCCTCGGTTTAAAAAGGCTGATTCAATCACAAATGAGAAGCCTTATTCACGATTTGCACTAGAATCAACTCCTTGGGGGCAACCTGATGCAATCCAATGTTCTCAATTACAAACTTCCAAGGATTGTGAGTCTGATGTAAAAGCCTCAAAGACCTCTCTCACGGTATATGGGGAAATTGAGAAAAGGGTGGCTGAACTTGAGTTCAAAAAGTCTGGAAAGGATCTCAGAGCCCTTAAACACATTCTTGAAGCAATGCAGAGACGTAAAGATTCGTTAGACATTGCTAGAGATCAGGCTTCAAATTCTCCATCTGACAATAGGAATAGTACTAATTCCAATGAAAGCTCCAACATACAAAGCCCACGAGTACGACAGAAAGACCTGGCATCTGTCACGGTTGAGATGTCAAATTCTAACCGGGGTAGTAAATTGCCAATTGTCATCATGAAACCTGCGAAAGTTACTAGAAAAGTCAATAGTCCTTCTCCTACAGAATTATCAGTTCACGGAAAATCTGGTGTCAGCAAATGTTCCCCTAGTAATCCAAGAAATGGAAGATTAGCTGACAAAAATAGTGCTAAAGGCACAAGTTCAACAAAAAATAACAAGGGTCCTTTTGGCCAACAGGTTCGTCCATCATATAAAAACTTGAGAACTTCAAAATTGATGCAATCCTTGGAAGTTTCTCAAGAGAACACTGAAGAATGCACCACCAATTCTGGTTATATAACTGTGACTGGGAGCCCCAGATTACAAAAGAAGTTTGGTCTGGAGAGGTGTTCACGACCAACCAGTTCATCGTCGGATTCCTGCATTAACAGAAGAGAGCACAATAGGCAACATGTGGAATTGTCTTCTCCAAGTACAACACCAACACATAAGTTCTCCAGTTTGCAGCAAATAAATGAACGTTTCAGTGAGATCAGTAGTAACTGGAGGAATTTTAAGCACCGTGTTAATGTCATTTCGGACTTAGACGACAAAAGAAACTCGATCGGTCATAGTGAGATTGAAGTCATTCGAATTGATCAAACTGGAAAGATCATTAGTTCCTCCATCCAGCTGAGTTCTATGCATCAATATAATGCATTTGAAGAGTTGATGAAGACTGAGACAATGGTTACTGCGGAACAACCAAGTCCTGTGTCTGTTCTTGATGCTGCATTCTATAGAGATGATCCACCATCTCCAGTGAAAAAGAAACCAGACATCTCAAAATATTTAGGTGAAGCTCAAAGCACTGATGGTGACAGTGAAGAGAACTCAATGGATATACTTCAAGAAATTGACTGGATTGAAGAGAAACTAATCAATTTCAATAACTCTAAGCACCCTGACCATAAGTATATAACAGAAATACTGTTAGCATCAGGTCTGCTCAGTGGCCACAGTTCCAGCCAGATATTTCACTCGCCGGGTCACTTGATTAATCCAAAATTGTTCTTTGCACTTGAAAAAGTGAAGACAGAGAAGAGACATTTTAACATTGATGCCAATGCCAAAAAGATTGCCAGGTTAAAAAATCCTGAGCAGATGCAAAGAAAACTCATATTTGATGTTGTCAATGACATTTTAGTTCAAAAGATGATATTGGATAGTTCTTCTGCATTGTGGTGCCAACCAAGTGAGTTTGCAGGCACAAGACCAAAAGGGCAGCAGCTTTTGGATGAGCTGTGCACAGAAATAGATCAGTTGCAGCCTCAAAATGGGAATGTCAGTTTAGCTAATGAGGATGAGAATTTGAAGCATCACCATGCAATTTGGACTAACTGCTGCACTGAGATACCAAATGTTGTGTTGGATATTGAACGTTTGATCTTTAAGGATTTGATAACCGAGGTTGTGAGAGGTGAAGTAGCAAACCACACTGGTACACATTGCAGGCAACTAGTGTTTTTCAAGTAG 2853 0.4115 MSGKSLKSLKDENPDLQKQIGCITGFFQLFDRHRFLTGQRSGTCIQHSPTSGASSYEINELNGTMLKTKAKNLKDAREKQQFSTESSITSLSSSSCSSSMSSLEFNRTIQMQSSSRNQTKIPENTNSKVAKKQLDTSRHQSLHFNHIVKDSMHKEAQGLSVRTVAEEEKKGHTNTLKLIDSPRPLRSQKSVNAGVTVAGEPFHTLAKSKKTPWDSPRLSYDETFKSATKHKEFPRLSLDSREGSNEGNKSRNLLKGQQKGYAKSSSTMINQLQEPESSKRSSSVVAKLMGLEALPIGTSSCSSTSDEDKHHQKFALPRFKKADSITNEKPYSRFALESTPWGQPDAIQCSQLQTSKDCESDVKASKTSLTVYGEIEKRVAELEFKKSGKDLRALKHILEAMQRRKDSLDIARDQASNSPSDNRNSTNSNESSNIQSPRVRQKDLASVTVEMSNSNRGSKLPIVIMKPAKVTRKVNSPSPTELSVHGKSGVSKCSPSNPRNGRLADKNSAKGTSSTKNNKGPFGQQVRPSYKNLRTSKLMQSLEVSQENTEECTTNSGYITVTGSPRLQKKFGLERCSRPTSSSSDSCINRREHNRQHVELSSPSTTPTHKFSSLQQINERFSEISSNWRNFKHRVNVISDLDDKRNSIGHSEIEVIRIDQTGKIISSSIQLSSMHQYNAFEELMKTETMVTAEQPSPVSVLDAAFYRDDPPSPVKKKPDISKYLGEAQSTDGDSEENSMDILQEIDWIEEKLINFNNSKHPDHKYITEILLASGLLSGHSSSQIFHSPGHLINPKLFFALEKVKTEKRHFNIDANAKKIARLKNPEQMQRKLIFDVVNDILVQKMILDSSSALWCQPSEFAGTRPKGQQLLDELCTEIDQLQPQNGNVSLANEDENLKHHHAIWTNCCTEIPNVVLDIERLIFKDLITEVVRGEVANHTGTHCRQLVFFK* 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1112 950 MobiDBLite consensus disorder prediction 167 187 - -
Vra4g1112 950 MobiDBLite consensus disorder prediction 709 736 - -
Vra4g1112 950 Pfam Domain of unknown function (DUF4378) 762 929 IPR025486 -
Vra4g1112 950 MobiDBLite consensus disorder prediction 231 248 - -
Vra4g1112 950 PANTHER LONGIFOLIA PROTEIN 314 740 - -
Vra4g1112 950 PANTHER LONGIFOLIA PROTEIN 740 949 - -
Vra4g1112 950 PANTHER LONGIFOLIA PROTEIN 1 304 - -
Vra4g1112 950 MobiDBLite consensus disorder prediction 412 452 - -
Vra4g1112 950 PANTHER LONGIFOLIA PROTEIN 314 740 IPR033334 GO:0051513
Vra4g1112 950 PANTHER LONGIFOLIA PROTEIN 1 304 IPR033334 GO:0051513
Vra4g1112 950 PANTHER LONGIFOLIA PROTEIN 740 949 IPR033334 GO:0051513
Vra4g1112 950 Coils Coil 398 418 - -
Vra4g1112 950 MobiDBLite consensus disorder prediction 473 531 - -
Vra4g1112 950 MobiDBLite consensus disorder prediction 249 284 - -
Vra4g1112 950 MobiDBLite consensus disorder prediction 231 284 - -
Vra4g1112 950 MobiDBLite consensus disorder prediction 82 98 - -
Vra4g1112 950 MobiDBLite consensus disorder prediction 410 452 - -
Vra4g1112 950 MobiDBLite consensus disorder prediction 574 610 - -
Vra4g1112 950 MobiDBLite consensus disorder prediction 471 531 - -
Vra4g1112 950 MobiDBLite consensus disorder prediction 71 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1112 Vra-Chr4 18220196 18225489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1112 139 949 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 30.736 3.96e-83 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1112 - - vun:114182931 1639.01