Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1109 ATGCATGTGGTACAAGTTTTCAGTATAGCACCAACTTTGGAATCAGAAGAATTACCAACTCAAACATCGCTTCCCCTCACCTTCTTTGAAATACTGTGGTTAAGGTCACCTCCTATTCAACGCATCCTCTTCTACCAATTCTCTCACCCAACCCCACCCTTCTTCCATACCCTTCTTCCCAAACTCATACACTCTCTTTCTCTTGCACTCGGCCACTTTTTTCCTCTTGCAGGCCACCTCACTTGGCCCCTTCACTCCCAGAACCCCATGATCATTTACAAAACGGGTGACTCTGTTTCTCTCACAGCAGCTGAATCTGAGGCTGATTTCAACCATCTAGCGGGCTCAAATCTTTGGAAAACTGAAGAAATGCACCATCTTTTACCTCACTTGACCATATCACATGAACAGGCTAAGCTTTTAGCCTTGCAAATCACTCTGTTTCCAAACTCTGGATTTTCCATTGGAATAACCTCACACCGTGCTGTTCTTGATGCCAAGACTTCAACATCGTTTATCAAGTCCTGGGCTTATCTTTGTAGAGAATCACGCGCACCCCCTTGTTTGCCACCTGAACTATGTCCTTTCTATGAAAGGGTACTACTAGTAAAAGACCCCAACCAAATAGGGGGGAAATTCCTCAATGATTGGTTAATGCAGGGAGGATCCAACAACAGAAGCCTCATGGTTTGGGATGTGAAATCTCCGGAACATGCAACTGGAGGCTTATTTAAATTGTCTGGTTCAGATATTGAAAAGCTGAAGCATTTTGTTGTGTCTAAACAGAGACAGAACAACTTCAACCTTCATTTGTCAACGTTTGTGTTGTCTCTTGCCTATGCATGGGTTTGCAGGGTGAGAGCCGAGGAAATGAAAAACGAGAGAGTTATGTTGATTCTGACTGTGGATTGCAGGGGTTGTTTGGAGCCATCTCTTCCTCCGACCTATTTTGGTAACTGTGTTGGATTAAGACTTGCAATTGCTGAAAGAAGAGAATTGCTGGGGGAGGATGGACTGATTGTGGCTGTGGAAGCACTGAGTGAAGCTTTGGAAAGTGTGAAGAAGGACGGTGTTCTGATTGGAGCTGAAAATTGGTCATCATGGTTGCTTGATTGTGTGGGGTGTGAAGCTGATGTGAAGGCGATTGGAGTTGCAGGGTCACCGAATTTTGAGGCTTACAGCAGTGACTTTGGATGGGGAGGACCAAAGAAGGTGGAGACAGTATCTATCGAAAGAACTGCAGTGTTTTGTCTTTCAGATAGCAACAATGGAGAAGGGATTGAGATAGGTTTTGGTTCCAAGAAAACAACAATGGAGACCTTTGCTTCTCTTTTTGCTAAAGGACTTCAATCTTGA 1356 0.4425 MHVVQVFSIAPTLESEELPTQTSLPLTFFEILWLRSPPIQRILFYQFSHPTPPFFHTLLPKLIHSLSLALGHFFPLAGHLTWPLHSQNPMIIYKTGDSVSLTAAESEADFNHLAGSNLWKTEEMHHLLPHLTISHEQAKLLALQITLFPNSGFSIGITSHRAVLDAKTSTSFIKSWAYLCRESRAPPCLPPELCPFYERVLLVKDPNQIGGKFLNDWLMQGGSNNRSLMVWDVKSPEHATGGLFKLSGSDIEKLKHFVVSKQRQNNFNLHLSTFVLSLAYAWVCRVRAEEMKNERVMLILTVDCRGCLEPSLPPTYFGNCVGLRLAIAERRELLGEDGLIVAVEALSEALESVKKDGVLIGAENWSSWLLDCVGCEADVKAIGVAGSPNFEAYSSDFGWGGPKKVETVSIERTAVFCLSDSNNGEGIEIGFGSKKTTMETFASLFAKGLQS* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1109 451 Gene3D - 236 451 IPR023213 -
Vra4g1109 451 Pfam Transferase family 16 443 - -
Vra4g1109 451 Gene3D - 1 228 IPR023213 -
Vra4g1109 451 PANTHER ACYLTRANSFERASE, PUTATIVE-RELATED 1 451 - -
Vra4g1109 451 PANTHER - 1 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1109 Vra-Chr4 18193148 18194859 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1109 65 441 Monolignol Biosynthesis Gene Families AT5G48930 23.426 5.24e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1109 - - vun:114186114 808.52