Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1107 ATGAAAGTGGTAGATGTATTCAACGTAGCTCCAACTTCAGAATCGAAAGAGTTACCAACTCAATCAACGCTTCCACTCACCTTCTTTGACATATTATGGCTAAGGCTGCCTCCTGTTGAACGTATCTTCTTCTATCAATTTCCTCATCCTACTCTTCTCTTCTTCGATACCCTTCTTCCCAAACTCAAACACTCTCTCTCTCTCGCACTTGCTCACTTTTTCCCTCTCGCCGGACACCTCACTTGGCCCCTTCACTCCCAAATCCCCATCCTCACTTACAAATCCGGTGACACTGTTTCCCTTACTGTAGCTGAATCTGATGCTGATTTCGACCATCTAGCAGGCACGGATCTTGCTGAGGCTAGAGAAATCCACCACCTTTTACCCCACTTGACCATATCCCACGATCAAGCAAACGTTCTAGCCTTGCAAGTCACTCTATTTCCAAACTCTGGATTTTCCATAGGAATAACCTCGCACCATGCAGTTCTAGATGGCAAGACTTCAACCTCGTTTATCAAAGCCTGGGCTTATCTTTGCAGAGATCAACCACAATCAACTTTTTCTCTTCCACCTGAACTTTCTCCGTTTTTTGGCAGGGAGGTAGTCCAAGACCCCAATCATTTAGAAAAAGAATTTATCAGCGATTGGTTAAGACAGGGTGGACCCAACAACAGAAGCCTCGTAGTTTGTGATCTGCAAGTCCCAGACGATGCAACCAGAGGCGTGTTTCATCTCGGTCGTTCAGATATTGAAAAGCTGAAGCAGATTGTGGTGTCCAAGAAGAAAGGGAACAGCAGCAACCTCCGCATGTCAACATTTGTGTTATCCGTTGGTTATGCTTGGGTTTGCAGGGTGAGAGCAGAGGAAACAAAAAACAAAATGGTAACGTTGGCTTTGAACTTTGACTGCAGGAATCGTTTGGAGCCGCCAGTTCCCGCAACGTATTTTGGGAACTGTGTAGGGGCGAAGCTTGCAACTGCTGAAACAAAGGAGATATTGGGGGAGGATGGACTCATTGTGGCAGTGGATGTACTGAATGAGAGTTTGGAAACTCTGAAGGAGGGAGCGCTGAGCGGGGCGGAAAATTGGTCAAAGTGGTTGCTTGAAGGTTTCAAAATTGATACGAAGATAGTTGGCGTTGCTGGGTCACCGAGGTTTGATGCTTATAGTAATGACTTTGGTTGGGGAAGACCAAAGAAGGTTGAGATGGTTTCTATAGACAGAACTGGCGCATTTTGTTTATCAGATAGCAGAAATGGTGATGGGGTTGAGATAGGTTTTGTGTCCACCAAAGAAGCAATGCACACTTTTGCGTCTCTCTTTCTCAATGGCCTTCTCCAATCTTGA 1350 0.4563 MKVVDVFNVAPTSESKELPTQSTLPLTFFDILWLRLPPVERIFFYQFPHPTLLFFDTLLPKLKHSLSLALAHFFPLAGHLTWPLHSQIPILTYKSGDTVSLTVAESDADFDHLAGTDLAEAREIHHLLPHLTISHDQANVLALQVTLFPNSGFSIGITSHHAVLDGKTSTSFIKAWAYLCRDQPQSTFSLPPELSPFFGREVVQDPNHLEKEFISDWLRQGGPNNRSLVVCDLQVPDDATRGVFHLGRSDIEKLKQIVVSKKKGNSSNLRMSTFVLSVGYAWVCRVRAEETKNKMVTLALNFDCRNRLEPPVPATYFGNCVGAKLATAETKEILGEDGLIVAVDVLNESLETLKEGALSGAENWSKWLLEGFKIDTKIVGVAGSPRFDAYSNDFGWGRPKKVEMVSIDRTGAFCLSDSRNGDGVEIGFVSTKEAMHTFASLFLNGLLQS* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1107 449 Pfam Transferase family 15 440 - -
Vra4g1107 449 PANTHER ACYLTRANSFERASE, PUTATIVE-RELATED 1 446 - -
Vra4g1107 449 Gene3D - 1 227 IPR023213 -
Vra4g1107 449 Gene3D - 235 448 IPR023213 -
Vra4g1107 449 PANTHER - 1 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1107 Vra-Chr4 18170772 18172426 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1107 42 438 Monolignol Biosynthesis Gene Families AT5G48930 25.301 4.59e-23 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1107 - - gmx:102660160 720.309