Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1102 ATGGCTTCCCACAACCTCAAAATCCATGAACAGTGCACTGTTGCTCCTCCCTCTGCGCCCCAAACATCCCTCCCTCTCGTATTCTTCGACCTGCTCTGGCTCAGGTTTCATCCTGTAGAACGCATCTTCTTCTATTCCCTCCCAGTAACCCATTCAAACCCATCCGTTTTCTTCACCCAAGTTGTTCCAAAGCTCAAAACTTCACTCTCTCACACCCTCCAACACTTTTCCCCTCTCGCNGGCAACGTCCTGTGGCCCCATGCTTCTCCANTCCCGGTCGTTCAGTACAACCCAGGCGANGCTNTTTCAGTGGTGCTTGCAGAATCCGAAGCCGACTTCGACCATGCGTTGGACAACGCTCCTAAAGACGCATCAGAGTCACGTTGTTTGGTGCCCCACTTGGAATCCTCGGATTCTCATGCCTCTGTTATGGCTCTCCAAATCACTCTGTTCCCTAACAGAGGGTTCGCCATNGGAATCACCACTCACCACGCCGTCCTTGANGGAAAATCTTCAACTCTTTTCATCAAAGCTTGGNCTTCTCTGTGNAAANCCANTGATGATNACTCTGNGTCATCACCATCTTTGGCTCCAGAATTGGAGCCNTTCTTTGACAGAACAGTCATCAAAACCCCAAGTGAGTTAGGGTTCNANTTANCANTCNNTNTGNNTGAGNNNNTAACCAAANNNTTCCCNAGTGAAAACAGTGACGGAAGATGCTTGAAGCTTCTACCTTTCCCTCCAAGATTGGAAGATCATGTTCGAGGGACATTCGTGCTCACGGGAGCAGATTTGGAAAGATTAAATAATAGGGTGCTGTCCAAGTGGGACAGTGTAGACATAGTTGAAGCAGAATCAGACTCAAACTCAACGGTTTCTCCAAAACCAACCAAATTGTCGACTTTTGTTCTAACTTGCGCTTATACTTTTGTTTGCATTGCCAAGGCCTGGCACGGAGTTGAGAAGGAGAAAAATAAGTTTGCCAGTGGGTTCACTATGGATTGCAGGGCCAGGTTGGAGCCTCCAATTCCTGAAAACTACTTTGGGAACTGTGTGTGGGGCAGTTTGGTGGATGCGAAGCCATCCGCATTTATAGAGGAAGAAGGATTGGTTATTATTGCGAAAAGTACTCATAGTAAAATAAAAGAGATGCTAGATAAGGGTGTTTTTCATGGGATAGCTAATGCGGCTCCTAGATATGCAGCTTTGGCAAAAGAGGGAGTTGAAATGTTAGGAGTTGCAGGGTCTAACCGTTTTGGGGTTTATGAGAATGATTTTGGTTGGGGAAAGCCTTCAAAGGTGGAGATAGCATCGGTGGATAGAGCCCTAACAATTGGATTGGCAGAGAACAGATATGCGAAAGGCGGTGTTGAAATTGGAATTGTTCTGAAGAGACCAGTGATGGATCTTTTTGCCACTATGTTTCGTGCAGGATTGTCAGATGAGTGA 1449 0.4569 MASHNLKIHEQCTVAPPSAPQTSLPLVFFDLLWLRFHPVERIFFYSLPVTHSNPSVFFTQVVPKLKTSLSHTLQHFSPLAGNVLWPHASPXPVVQYNPGXAXSVVLAESEADFDHALDNAPKDASESRCLVPHLESSDSHASVMALQITLFPNRGFAXGITTHHAVLXGKSSTLFIKAWXSLXKXXDDXSXSSPSLAPELEPFFDRTVIKTPSELGFXLXXXXXEXXTKXFPSENSDGRCLKLLPFPPRLEDHVRGTFVLTGADLERLNNRVLSKWDSVDIVEAESDSNSTVSPKPTKLSTFVLTCAYTFVCIAKAWHGVEKEKNKFASGFTMDCRARLEPPIPENYFGNCVWGSLVDAKPSAFIEEEGLVIIAKSTHSKIKEMLDKGVFHGIANAAPRYAALAKEGVEMLGVAGSNRFGVYENDFGWGKPSKVEIASVDRALTIGLAENRYAKGGVEIGIVLKRPVMDLFATMFRAGLSDE* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1102 482 Pfam Transferase family 18 473 - -
Vra4g1102 482 SUPERFAMILY CoA-dependent acyltransferases 295 474 - -
Vra4g1102 482 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 482 - -
Vra4g1102 482 PANTHER - 1 482 - -
Vra4g1102 482 Gene3D - 249 481 IPR023213 -
Vra4g1102 482 Gene3D - 6 227 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1102 Vra-Chr4 18136321 18138122 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1102 6 471 Monolignol Biosynthesis Gene Families AT5G48930 24.008 5.99e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1102 - - gmx:100815354 682.174