Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1101 ATGGAAATCCATGAGCAGTGCTTCGTTTCTCCTTCCCCATCTCCACCAAACTTCTCTCTCCCATTAACCTTCTTTGATCTTAATTGGCTAAGGTTTCATCCAGTTGAGCGAATCTTCTTCTACCCACTTCCCCTTCTTCATTCCAACCCTTCTTTTTTCTTTCACAAAGTGCTTCCAAATCTCAAAACTTCACTTTCTCATACCCTTCAGCACTTCCCGCTTTTAGCCGGAAACATCATTTGGCCTTCTCATTCAGCCAAACCCTTCATCCAATTCAACCCTGGTGATGGCGTGTTATTGGTCCTAGCAAAGTGTAACGATGATGCAAAATTTAATCACCTTTTGGACAATTCGCCTCGTGATGCCTCCGAATCTCGCTCTTTGTTACCCCACTTGGAATCATCAGATTCTCATGCCTCAGTTATGTCTTTGCAGATAACGTTTTTTCCAAACAAGGGCTTTTCCATAGGCATCAACTCTCACCATGCTGTTCTTGATGGAAAATCGTCAACCATGTTTGTCAAGGCTTGGGCTTATGCATGTAAATCATGCGAAGAGGAATCTCCGCTATCTCTGAAGCCGGAGTTAGAGCCTTTATTTGATAGGGATTTGATCAAAGATCCAACTTGTCTTGAAACTGCCATCATCAATAACTGGACCCTAATGGCAACTCAAATAGACCCTTCTGATACAAGCAACGGCCGAAGCTTAAAGATTATGTCACTACCAACCCGGGCAAACCTAGTTCGAGCCATGTTTGATCTCAAACGAGGAGATTTGGAGAAGATAAAGAAAAGGGTGTTGTCGAAGTGGGAGTTGGTGGAGGAGGAAACATTTTCAGCTTTTTCAAAACCAACCACTTTGTCTACCTTTGTCGCTTGTTGTGCTTATGTGTCTGTCTGCATTGCTAAAGCCACTCATGGAGCTGAAAATGCAGATAAATTTTGTCTAGCGTTCACTGCTGATTGCAGGGCTCGGTTAGAACATCCAATCCCTGAGAACTACTTTGGAAATTGTGTGGTTTCACATATAGTGGATACACAGCCTGATGACTTTATAAAAGAGGATGGAGTGGTTGTTGTTGCCAAGAGGATTTGGAGTAAAACAAAAATGTTGGAGAAGAGACTTATTGAAGGAATAGATACAGTAATTCCTAGGTTTGGAGCTATGTTAAGAGAGGGAGTTAAGGGAATTAGTGTTTCTGGGTCCAACCGATTTGGTGTTTATGAAAGTGATTTTGGTTGGGGAAGGCCTGCCAAGGTGGAGATAACATCCATAGATAGAGGTTTAACCATTGGTTTGGCAGAAAGCAAAGATGAGAAAGGTGGTGTTGAAGTTGGGCTAGCTCTGAACAAACATGCCATGGATCTGTTTCAAGCAATTTTTTATGAAGGGTTATGCATCGACTAA 1410 0.4234 MEIHEQCFVSPSPSPPNFSLPLTFFDLNWLRFHPVERIFFYPLPLLHSNPSFFFHKVLPNLKTSLSHTLQHFPLLAGNIIWPSHSAKPFIQFNPGDGVLLVLAKCNDDAKFNHLLDNSPRDASESRSLLPHLESSDSHASVMSLQITFFPNKGFSIGINSHHAVLDGKSSTMFVKAWAYACKSCEEESPLSLKPELEPLFDRDLIKDPTCLETAIINNWTLMATQIDPSDTSNGRSLKIMSLPTRANLVRAMFDLKRGDLEKIKKRVLSKWELVEEETFSAFSKPTTLSTFVACCAYVSVCIAKATHGAENADKFCLAFTADCRARLEHPIPENYFGNCVVSHIVDTQPDDFIKEDGVVVVAKRIWSKTKMLEKRLIEGIDTVIPRFGAMLREGVKGISVSGSNRFGVYESDFGWGRPAKVEITSIDRGLTIGLAESKDEKGGVEVGLALNKHAMDLFQAIFYEGLCID* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1101 469 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 2 469 - -
Vra4g1101 469 Pfam Transferase family 2 462 - -
Vra4g1101 469 Gene3D - 1 232 IPR023213 -
Vra4g1101 469 Gene3D - 245 468 IPR023213 -
Vra4g1101 469 PANTHER - 2 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1101 Vra-Chr4 18128612 18130220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1101 1 464 Monolignol Biosynthesis Gene Families AT5G48930 24.370 3.42e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1101 - - gmx:100813762 664.84