Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1076 ATGGAGCAGTACTATCTCTCCCTTCTGTTCCTATTTTTCTCTCTCATCTCTCTCTCCTTTTTCTTCCTTTTCTACTGGCACAATGCTAAGCCCTCCGTCCCTAACTTGCCACCGGGAAATATGGGGTTTCCGGTGGTCGGCGAGAGCGTTGAATTTCTATCATTATGGTGGAAAGGGAATCCAGAGAANTTCATATACGAACGCATGGCAAAGTACTCTTCCAAAGTGTTCAAGACCTCTATCTTTGGCGAGAATACAGTCATGGTCTGTGGAGCCGCATGCAACAAGTTTTTGTTCTCGAACGAAAACAAACTGGTCATGTTTTGGTGGCCAGGTAATGTGAACAAGATATTCCCATCCACGCTTGAAACCAGCACTAGTGTTGAAGCCAAGAAATTGAGGAACATGCTCCCTCAGTTCCTCAGCGCCCAGGCCCTCCAACGTTACATTGGTATCATGGACAACGTTGCCCAAAGACACTTTGCTTCAGAATGGGAGAACAAGACCTATGTCACCGTCTTCCACTTGGCCAAGAGGTATACCTTCAGGGTGGCCGTCCGTTTGTTTATCAACGTTGATGATCCGATCCATGCGGAAAATTTGTTTGAGTCTTTCAATAGAATAGCCCCAGGACTCATGTCAGTGCCCATTGACTTGCCTGGAACTCCGTTCAACAAAGCCATCAAGGCCTCCAAGTTCATTAAGGAGAAACTGTTGAAGATTATCAGACAGAGGAGAGAGGAACTGGCTAATGGAACAGCGTCACAAACTCAAGATTTTTTGTCTCACATGTTATCATCATGCGATGAGAATGGACAATATATGACTGAACAATATATTGCTGACAAGATCCTTGGCCTGCTGGTAGGAGGCCACGAAACTGCAAGTTCTGTGTGCACTTTTGTCGTCAAATACCTTGCTGAGCTCCCTCCCAATATTTATGAAAATGTCTATCAGGAACAAACGGAGATTGCAAAACGGAAAGCTCCGGGAGAATTGTTGAATTGGGATGACATCCAGAAGATGAAATATTCGTGGAATGTTGCTTGTGAAGTAATGAGACTTACGCCTCCAGTCCAGGGTGCTTTCAGGGAAGCCATGGATGACTTTGTGTTAAATGGATTCTCAATTCCAAAAGGCTGGAAGTTGTATTGGAGTGCAAGTTCAACACACAAGAATCCAGAGTACTTCGCAGAGCCAGAGAAGTTTGATCCGAGTAGATTTGAAGGAACAGGACCAGCTCCTTATACTTATGTGCCATTTGGAGGAGGGCCAAGGATGTGCCCTGGAAAAGAGTATGCTCGAATGGAAATATTGGTGTTCATACACAACTTGGTCAAAAGGTTCAAATGGGAAGCCATTATTCCTGATGAGAATATTTTTAATGATCCCATGCCTGTTCCTGCCAAAGGCCTCCCTGTTCGTCTTTATCCTCACCAACATTGA 1446 0.4474 MEQYYLSLLFLFFSLISLSFFFLFYWHNAKPSVPNLPPGNMGFPVVGESVEFLSLWWKGNPEXFIYERMAKYSSKVFKTSIFGENTVMVCGAACNKFLFSNENKLVMFWWPGNVNKIFPSTLETSTSVEAKKLRNMLPQFLSAQALQRYIGIMDNVAQRHFASEWENKTYVTVFHLAKRYTFRVAVRLFINVDDPIHAENLFESFNRIAPGLMSVPIDLPGTPFNKAIKASKFIKEKLLKIIRQRREELANGTASQTQDFLSHMLSSCDENGQYMTEQYIADKILGLLVGGHETASSVCTFVVKYLAELPPNIYENVYQEQTEIAKRKAPGELLNWDDIQKMKYSWNVACEVMRLTPPVQGAFREAMDDFVLNGFSIPKGWKLYWSASSTHKNPEYFAEPEKFDPSRFEGTGPAPYTYVPFGGGPRMCPGKEYARMEILVFIHNLVKRFKWEAIIPDENIFNDPMPVPAKGLPVRLYPHQH* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1076 481 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1076 481 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1076 481 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1076 481 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1076 481 Pfam Cytochrome P450 37 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1076 481 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1076 481 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1076 481 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1076 481 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1076 481 PANTHER CYTOCHROME P450 26 7 477 - -
Vra4g1076 481 SUPERFAMILY Cytochrome P450 33 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1076 481 Gene3D Cytochrome P450 27 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1076 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Vra4g1076 481 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE 7 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1076 Vra-Chr4 17875506 17877770 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1076 27 383 Cytochrome P450 AT5G36110 55.000 3.82e-137 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1076 K20667 - jre:108989520 710.294