Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1075 ATGAAATATTCGTGGAATGTTGCTTGTGAAGTAATGAGACTTGCGCCTCCACTCCAGGGTGCTTTCAGGGAAGCCATGGATGACTTTGTGTTAAATGGATTCTCAATTCCAAAAGGCTGGAAGTTGTATTGGAGTGCNAGTTCAACACACAAGAATCCAGAGTGCTTCGCAGAGCCAGAGAAGTTTGATCCGAGTAGATTTGAAGGAAAAGGACCAGCTCCTTATACTTATGTACCATTTGGAGGAGGGCCAAGGATGTGCCCTGGAAAAGAGTATGCTCGAATGGAAGTATTGGTGTTCATGCACAACTTGGTCAAAAGGTTCAAATGGGAAGCCATTATTCCTGATGAAAAAAAATTTTATGATCCCATGCCTGTTCCTGCCAAAGGCCTTCCTGTTCGTCTTTATCCTCACCAACCTTGA 423 0.4374 MKYSWNVACEVMRLAPPLQGAFREAMDDFVLNGFSIPKGWKLYWSASSTHKNPECFAEPEKFDPSRFEGKGPAPYTYVPFGGGPRMCPGKEYARMEVLVFMHNLVKRFKWEAIIPDEKKFYDPMPVPAKGLPVRLYPHQP* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1075 140 PANTHER P450, PUTATIVE-RELATED 1 136 - -
Vra4g1075 140 SUPERFAMILY Cytochrome P450 1 137 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1075 140 Gene3D Cytochrome P450 1 137 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1075 140 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 80 89 IPR017972 GO:0005506|GO:0016705
Vra4g1075 140 PANTHER CYTOCHROME P450 26 1 136 - -
Vra4g1075 140 Pfam Cytochrome P450 1 118 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1075 140 PRINTS P450 superfamily signature 6 17 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1075 140 PRINTS P450 superfamily signature 78 87 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1075 140 PRINTS P450 superfamily signature 87 98 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1075 140 PRINTS E-class P450 group I signature 45 69 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1075 140 PRINTS E-class P450 group I signature 77 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1075 140 PRINTS E-class P450 group I signature 87 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1075 Vra-Chr4 17868887 17869468 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1075 1 138 Cytochrome P450 AT3G19270 42.029 1.79e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1075 K20667 - vra:106758466 308.145