Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1051 ATGCTTTGTTCCTCTTTTGTTCTTCCTCTTTCCAATCTTCAATTTCAGGGTTCCTTTAATCTCAACGTTCCTCTTCAATCTCAAGCTCCGTTCACTCCAACACCACTACGGTTGCACAATGGGAGCCATTCCTGTTTATTCTCTGAACCCCTCCTTCATTTTAAAGATTTAGAAATGGATGGACCAGCTGGCCGAGGTGGTACTGGCCTCGACATGTTTGTACCAAATTATAAATTGGGAAAAACTCTTGGGATTGGATCTTTTGGCAAGGTGAAAATTGCAGAACATGTATTGACTGGTCATAAGGTTGCAATCAAGATCCTAAATCGGCGCAAGATAAAGAACATGGAAATGGAAGAAAAAGTGAAATTAGAACTTGAAGTTTTAAAATTGCTCAATCATCCTCGCATTATAAAACTTCATGAGGTGATAGAAACTCCAACTGACATATGTGTTGTTATGGAGTATGCTTGTAGAGAGCTTTTTGATTACGTAATAGAAAAAGGAAGGTTAGAAGAAGACGAAGCTCGTAATATTTTTCAGCAGATAATCTCAGGAGTGGAGTATTGTCACAATAAGATGGTGGCTCATAGAGATTTGAAACCTGAAAACATACTTTTGGACTTCAATTGTGATGTCAAGATAACTGGTTTTGGCTGGAGCAACATCATGCATGCTGGTTACTTTCTTAAGACAAGTTGTGGAAGCCCTAACTATGCAGCTCCTGAGGTTATATGTGGAAAATTATATACTGGACCCGAAGTTGATGTATGGAGTTGTGGTGTAGTTCTGTATTTTATTCTTTGTGGATTTCTACCTTTTGACGATGAAAACATTCCAAATCTCTTCAACAAAATAAAGGGAGGGGTTTTCACCATTCCATGTTACCTATCTCCTGGAGCTAGAGATTTGATATCAAAGATGCTTGATGTGGAACCTCTCAAAAGGATAACAGTATCTGAGATCCAACAACACCCATGGTTGCAACTTCAACTTTAG 999 0.3864 MLCSSFVLPLSNLQFQGSFNLNVPLQSQAPFTPTPLRLHNGSHSCLFSEPLLHFKDLEMDGPAGRGGTGLDMFVPNYKLGKTLGIGSFGKVKIAEHVLTGHKVAIKILNRRKIKNMEMEEKVKLELEVLKLLNHPRIIKLHEVIETPTDICVVMEYACRELFDYVIEKGRLEEDEARNIFQQIISGVEYCHNKMVAHRDLKPENILLDFNCDVKITGFGWSNIMHAGYFLKTSCGSPNYAAPEVICGKLYTGPEVDVWSCGVVLYFILCGFLPFDDENIPNLFNKIKGGVFTIPCYLSPGARDLISKMLDVEPLKRITVSEIQQHPWLQLQL* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1051 332 Gene3D Transferase(Phosphotransferase) domain 1 69 332 - -
Vra4g1051 332 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 66 330 - -
Vra4g1051 332 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Vra4g1051 332 PANTHER SERINE/THREONINE KINASE 66 330 - -
Vra4g1051 332 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Vra4g1051 332 SUPERFAMILY Protein kinase-like (PK-like) 74 329 IPR011009 -
Vra4g1051 332 SMART serkin_6 77 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra4g1051 332 Pfam Protein kinase domain 77 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra4g1051 332 ProSiteProfiles Protein kinase domain profile. 77 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1051 Vra-Chr4 17708968 17712825 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1051 74 328 CBL-interacting serine-threonine protein kinases AT4G24400 46.693 1.62e-85 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Vra4g1051 Pkinase 8.2e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1051 K07198 - gmx:100796687 434.491