Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1032 ATGGAGCAGTTCTATCAATCCCTTCTGCTCCTGTTTGTGTCTCTCGTCCCTCTCTCATTTTTCTTCCTTTTCTACAGGCATAATGCTAAGTCCTCCGTCCCCAACTTGCCACCGGGAAATATGGGGTTTCCGGTGGTTGGCGAGAGCATTGAGTTTATATCATTATGGTGGAAAGGGAATCCAGAGAAGTTCATATACGAACGCATGTCAAAGTACTCTTCCAAAGTGTTCAAGACCTCTATCTTTGGCGAGAATACGGTCATGGTCTGTGGAACCGCATGCAACAAGTTCTTGTTCTCTAACGAAAACAAACTGGTCGCGTCTTGGTGGCCAGACAACGTCAACAAGATATTCCCAGAGGCGGTTGAAAACTCAAAGGTTGAAGCCAAGAAGCTGAGGAACATACTCCCTCAGTTCCTCGGCGCCCAAGCCCTCCAACGTTACATTAGCGTAATGGACACCATTGCCCAAAGACACTTTGCTTTGGATTGGGAGAACAACACCTCTGTTACCGTGTTCCCCTTGGCCAAAAGGTATACCTTCTGGGTGGCTTGCCGTTTGTTTATCGACGTTGATGATCCGATCCATGCGGAAAGTCTTTTGGAGACTTTCAATAGAATAGCCCCAGGAATCATGTCAGTGCCCATTGACTTGCCTGGAACTCCGTTCAACAAAGCCATCAAGGCCTCCAAGTTCGTTAAGGAGAAGCTGTTGAAAATTATCAGACAGAGGAAAGAGGAACTGACCAATGGAACAGTGTCACAAACTAAGGATTTTTTGTCTCACATGTTATCATCATGCGATGAGAATGGACAATATATGACTGAACAATATATTGCTGACAAGATCCTTGGCCTGTTGGTAGGAGGCCACGACACTGCAAGTTCTGTATGCACTTTTGTTGTCAAATACCTCGCTGAGCTCCCTCTCATTTATGAAAATGTCTATCAGGAACAAATGGAGATTGCAAAATCGAAAGCTCCGGGAGAATTGTTGAATTGGGATGACATCCAGAAGATGAAATATTCGTGGAATGTTGCTTGTGAAGTAATGAGACTTGCGCCTCCAGTCCAGGGTGCTTTCAGGGAAGCCATGGATGACTTTTTGTTAAATGGATTCTCAATTCCAAAAGGCTGGAAGTTGTATTGGAGTGCAAGTACAACACACAAGAATCCAGAGTGGTTCGCAGAGCCAGAGAAGTTTGATCCAAGTAGATTTGAAGGAACAGGACCAGCTCCTTATACTTATGTACCATTTGGAGGAGGGCCAAGGATGTGCCCTGGAAAAGAGTATGCTCGAATGGAAATATTGGTGTTCATGCACAACTTGGTCAAAAGGTTCAAATGGGAAGCCATTATTCCTGATGAGAATATTTTTTATGATCCCATGCCTGTTCCTGCCAAAGGCCTTCCTGTTCGTCTTTATCCTCACCAACCTTGA 1440 0.4486 MEQFYQSLLLLFVSLVPLSFFFLFYRHNAKSSVPNLPPGNMGFPVVGESIEFISLWWKGNPEKFIYERMSKYSSKVFKTSIFGENTVMVCGTACNKFLFSNENKLVASWWPDNVNKIFPEAVENSKVEAKKLRNILPQFLGAQALQRYISVMDTIAQRHFALDWENNTSVTVFPLAKRYTFWVACRLFIDVDDPIHAESLLETFNRIAPGIMSVPIDLPGTPFNKAIKASKFVKEKLLKIIRQRKEELTNGTVSQTKDFLSHMLSSCDENGQYMTEQYIADKILGLLVGGHDTASSVCTFVVKYLAELPLIYENVYQEQMEIAKSKAPGELLNWDDIQKMKYSWNVACEVMRLAPPVQGAFREAMDDFLLNGFSIPKGWKLYWSASTTHKNPEWFAEPEKFDPSRFEGTGPAPYTYVPFGGGPRMCPGKEYARMEILVFMHNLVKRFKWEAIIPDENIFYDPMPVPAKGLPVRLYPHQP* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1032 479 PRINTS P450 superfamily signature 289 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1032 479 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1032 479 PRINTS P450 superfamily signature 417 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1032 479 PRINTS P450 superfamily signature 426 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1032 479 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE 8 475 - -
Vra4g1032 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 419 428 IPR017972 GO:0005506|GO:0016705
Vra4g1032 479 Gene3D Cytochrome P450 26 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1032 479 Pfam Cytochrome P450 37 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1032 479 SUPERFAMILY Cytochrome P450 33 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1032 479 PRINTS E-class P450 group I signature 278 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1032 479 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1032 479 PRINTS E-class P450 group I signature 416 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1032 479 PRINTS E-class P450 group I signature 426 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g1032 479 PANTHER CYTOCHROME P450 26 8 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1032 Vra-Chr4 17530182 17532477 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1032 26 381 Cytochrome P450 AT5G36110 56.111 1.12e-139 405