Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1018 ATGACTTTTCTGTTTTCTATTGCCGCTACTGCATTTTACACGGGCCTTCTGATTAAAAGATGCATGGATAAGGACTCAAACATTAGAACCTACCCTGATATAGGTGAACTTGCATTTGGAAAGACAGGAAGACTGATAATATCAATATCCATGTACACGGAACTATATCTGGTTTCAATAGGATTCTTGATTCTAGAAGGTGATAACTTGAATAACATATTCCCCATTGGAGAGGTTCACATAGCAGGCTTAACAATTGGTGGGAAGCAATTATTTGTGATTATGGTTGCCCTTATCATCTTGCCCACAGTTTGGTTGGACAACTTGAGTCTACTTTCTTATATATCTGCAAGTGGAGTCTTTGCTTCTGTTCTCATCATCCTTTCAATAACATGGACTGCAACATTTGACGGAGTTGGTTTTCATCATAAAGGAACTCTTGTCCATTGGAATGGTCTCCCCACAGCTGTTAGCTTGTATGCCTTCTGTTATTGCGCACATTCTGTCTTTCCGACGTTGTACAATTCGATGACAAATAAACATCAGTTCTCTAACGTCCTACTAGTATGTTTTCTCCTAACCACTGTGGGTTATGCATCCATGGCTATAGTGGGTTATTTAATGTTTGGCGAGGAGGTTGAATCACAAGTAACATTGAACCTACCTCTAGACAAAGTCAGCTCAAAATTAGCAATATACACAACCTTGGTGAATCCCATATCCAAGTTTGCTTTGATGGCAACACCTATTACGAATGCTTTGAAAGAGTTGCTTCCAATGACGTACAATAATAGGGTGACGAGCATCTTACTGAGCACATCGTTGGTATTGAGCACCACCATTATTGCCCTTGTTGTCCCTTTCTTTGGGTCTCTGATGTCATTGGTTGGAGCCTTTCTAAGTGTCACAGCTTCTATTCTGCTTCCATGCTTGTGCTACTTGAAGATTTCAGGCACTTACAAGAAATTTGGGTGTGAGACCGTAGCCATAGTGATAATAATAATGACAGCTATTGTAATGGCAATTTCAGGGACCTACATCTCTCTTATGGAAATAACCCACAATTTATAA 1071 0.3978 MTFLFSIAATAFYTGLLIKRCMDKDSNIRTYPDIGELAFGKTGRLIISISMYTELYLVSIGFLILEGDNLNNIFPIGEVHIAGLTIGGKQLFVIMVALIILPTVWLDNLSLLSYISASGVFASVLIILSITWTATFDGVGFHHKGTLVHWNGLPTAVSLYAFCYCAHSVFPTLYNSMTNKHQFSNVLLVCFLLTTVGYASMAIVGYLMFGEEVESQVTLNLPLDKVSSKLAIYTTLVNPISKFALMATPITNALKELLPMTYNNRVTSILLSTSLVLSTTIIALVVPFFGSLMSLVGAFLSVTASILLPCLCYLKISGTYKKFGCETVAIVIIIMTAIVMAISGTYISLMEITHNL* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1018 356 PANTHER AMINO ACID TRANSPORTER AVT1J 1 352 - -
Vra4g1018 356 Pfam Transmembrane amino acid transporter protein 3 347 IPR013057 -
Vra4g1018 356 PANTHER OS05G0424000 PROTEIN-RELATED 1 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1018 Vra-Chr4 17408444 17409674 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1018 8 352 Amino Acid or Auxin Permease AAAP Family AT3G28960 58.382 2.28e-153 436