Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1013 ATGGACTCCCCAAATGTTTCTTTCCTCAGCACTTGTCTGAATGGACTGAATGTTTTATCAAGTGTTGGTATACTCTCAGTTCCTTATGCTCTTGCAATAGGAGGTTGGTTAAGTTTGATTCTTCTATTTTTAATTGCCACTGCTACATTTTACACTGGCCTTTTAATTAAAAGATGTATGGATAACAATTCAAACATTCGAACCTATCCAGATATAGGAGAATTTGCATTTGGAAAAACAGGAAGATTAATAGTGTCAATAATAATGTACACAGAACTATATTTGGTTCCAATAGGATTTTTGATTCTAGAAGGTGATAATTTGAGCAACATGTTTCCTATTGGAAAGGTTCACATAGCAGGCTTAGGAATTGGTGGGAAACAATTATTTGTGATTATTGTTGCTCTTATCATTTTGCCCACAGTTTGGTTGGACAACCTGAGTCTACTCTCATATGTATCTACAACTGGAGTTTTTGCTTCTCTTCTAATAATCCTTTCAATAACATGGACTGGAACATTTGATGGAGTTGGTTTTCATCATAAAGGAACTCTTGTCCATTGGAATGGTCTCCCCACAACTGTTAGCTTGTATGTCTTCTGTTATGGTGCACATACTGTCTTTCCCATGTTGTACAATTCGATGAGAAACAAACATCACTTCTCAAAAGTCCTACTGGTATGTTTTCTCGTAGCCACTGTGGGTTATGCATCCATGGCAATAGTGGGTTATTTAATGTTTGGTGAGGAGGTTAAGTCTGAAGTAACATTAAACCTGCCTCTAAACAAAGTTAGCTCAAAAGTAGCAATATACACCGCCTTGATGAATCCCATATCCAAGTTTGCTTTGATGCTAACCCCTATTACGAATGCTTTGAAAGACTTGCTTCCAACAACCTACAAGAATAGGGTGACGAGCATCTTACTAAGCACAGTGTTGGTATTGAGCATCACTATTATTGCCCTTGCTGTCCCTTTCTTTGGATCTCTGATTTCACTGGTTGGAGCCTTTCTAAATGTCACAGCTTCTATTCTGCTTCCGTGCTTGTGCTACTTGAAGATTTCAGACACTTACAAGAAATTTAGGTGTGAAACAGTAGTTATAGTGATAATGATAATGATAGCTATTGTAATGGCAATTTCAGGAACCTACATTTCTCTCATGGAAATAGCACACAATCTATAA 1185 0.3722 MDSPNVSFLSTCLNGLNVLSSVGILSVPYALAIGGWLSLILLFLIATATFYTGLLIKRCMDNNSNIRTYPDIGEFAFGKTGRLIVSIIMYTELYLVPIGFLILEGDNLSNMFPIGKVHIAGLGIGGKQLFVIIVALIILPTVWLDNLSLLSYVSTTGVFASLLIILSITWTGTFDGVGFHHKGTLVHWNGLPTTVSLYVFCYGAHTVFPMLYNSMRNKHHFSKVLLVCFLVATVGYASMAIVGYLMFGEEVKSEVTLNLPLNKVSSKVAIYTALMNPISKFALMLTPITNALKDLLPTTYKNRVTSILLSTVLVLSITIIALAVPFFGSLISLVGAFLNVTASILLPCLCYLKISDTYKKFRCETVVIVIMIMIAIVMAISGTYISLMEIAHNL* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1013 394 Pfam Transmembrane amino acid transporter protein 6 386 IPR013057 -
Vra4g1013 394 PANTHER OS05G0424000 PROTEIN-RELATED 4 390 - -
Vra4g1013 394 PANTHER AMINO ACID TRANSPORTER AVT1J 4 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1013 Vra-Chr4 17318159 17321259 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1013 7 390 Amino Acid or Auxin Permease AAAP Family AT3G28960 56.883 1.79e-161 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1013 K15015 - gmx:100794374 605.134