Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0968 ATGGATCCCTTCAAAGGACAAGGAGGCATTCAGATGCTGCTAACCGCTGAACAAGAAGCACAACACATAATTTCTAATGCAAGAAATTTAAGAACCCAGAGGTTGAAGCAGGCAAAGGAAGAGGCTGAGAAAGAAGCTGCACAATACAGATCTCACATGGAAGATGAGTATCAAAATTCAATTTCAGAGACCACAGGGACTTCTGGATCTAATGTGAAAAGGCTTGAGGAGGAGACAGAGGCTAAGATTAAACTTTTAAAGAAATCAACTTCAGATGTTTCATCAAAAGTGGTTGAAATGCTGCTCAAGTGTGTTACAAATATCAAAATATAA 333 0.3874 MDPFKGQGGIQMLLTAEQEAQHIISNARNLRTQRLKQAKEEAEKEAAQYRSHMEDEYQNSISETTGTSGSNVKRLEEETEAKIKLLKKSTSDVSSKVVEMLLKCVTNIKI* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0968 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vra4g0968 110 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 8 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vra4g0968 110 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 62 90 IPR036612 GO:0003723
Vra4g0968 110 Coils Coil 32 59 - -
Vra4g0968 110 MobiDBLite consensus disorder prediction 37 73 - -
Vra4g0968 110 MobiDBLite consensus disorder prediction 53 72 - -
Vra4g0968 110 MobiDBLite consensus disorder prediction 37 52 - -
Vra4g0968 110 PANTHER V-TYPE PROTON ATPASE SUBUNIT G3 1 109 - -
Vra4g0968 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vra4g0968 110 SUPERFAMILY F1F0 ATP synthase subunit B, membrane domain 11 57 IPR028987 -
Vra4g0968 110 Gene3D - 3 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0968 Vra-Chr4 16781906 16782651 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0968 1 109 Primary Pumps ATPases(2) AT3G01390 56.881 1.63e-30 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0968 K02152 - gmx:100818549 159.844