Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0947 ATGGGCAGATCCATTTTTCTTCTTCAGCTTATACTTTCCTCATTTCTCCTTTTCATTTTCTTCCTGGAAGCTGTTCCTGCCACCAGAAAGTTATATATTGTATATTTGGGAGCTCATTCTCATGGTGCCAACCCCACTTCCGTTGATCTCCAAATTGCTACCGATTCTCATTATAATTTATTAACTTCAGTCCTGGGGAGTGAAGAGAAAGCGAAAGAAGCAGTAATTTACTCATACAACAGACACATAAATGGGTTTGCAGCGATGCTTGAAGAGGAAGAAGCAGCAGATATTGGCAAAAACCCTAACGTGGTGTCAGTGTTCTTGAGCAAAAAACATAAACTGCACACTACCCGTTCATGGGAATTTCTTGGACTACACAGAAATGGTAAGAACTCCGCATGGCAAAAGGGAAACTTTGGTGAAAATACAATAATCGCAAACATCGACACAGGTGTTTGGCCAGAGTCAGAGAGCTTCAGTGATGAAGGATATGGCCCCGTTCCCTCCAAATGGCGTGGGGGTAATGTCTGTCAATTTAACAAATTTTTAAGCAACAAGACAAATCTATGCAACAGAAAGCTGATAGGAGCAAGATTCTTCAATAAAGCTTACGAGGCATATAACGGCCCACTTGTTGCCCGGCTGCAAACAGCGCGTGACCTCATGGGACATGGGACTCACACTTTATCAACAGCTGGGGGCAATTTCGTCCCAGGCGCGAGTGTATTTGCTGTGGGTAATGGCACCGCAAAGGGTGGGTCCCCTAGAGCACGAGTTGCAGCGTACAAAGTGTGTTGGGATCTGGCGGACCCATCCGGTTGTTACGGAGCGGATATGTTGTCTGCTATCGACCAAGCCATCGACGACGGTGTCGATCTCATAAATCTTTCAGTTGGTGGATTTCACGACGTGAGCCCCGAAGGAATACTCACCGACGAGGTTTCCATTGGAGCCTTCCATGCGATTTCTAACAACATACTTTTAGTAGCCTCTGCAGGAAACGATGGACCAGATTCTGGTTCTGTGGTAAACGTTGCACCTTGGGTCTTCACCATTGCTGCTAGCACCATAGACAGAGACTTTAGCAGTACCTTAATCATCAACAACAATCAACAAATCGAGGGAGCGAGTCTTTTTGTAGACTTGCCACCGAATCAGGCCTTTTCGCTGATCCTCTCCACCGATGCTAAACTTCCTACTGCCACATTTCGGGATGCTCAACTGTGTAGAGCAGGAACACTGGATCCCAGAAAAGTGAATGGTAAAATAGTGTCATGCAGTCGCGAAAAGATAAAATCTGTCGTGGAGGGCCAGGAAGCTAAATCTGCAGGTGCAAAGGGAATGGTTGTGAGAAATCAACCGCAACAGGGAACTACACTTGAAGCTGAGCCCCATGTTTTCACTGCTGTGGGTGCACCTGCCCCTCATCCCCCTCCAAAACCAAAAAAAATTACAAAACACACTACATTTACAGAATTTCAAATAGCTGACACGGACCCTTTTAAATCAGGTGCTACCATAAAAATGTCTCCAGCAAGAACATTATTTGGAAGAAAGCCAGCTCCAGTTATGGCTTCATTCTCATCAAGGGGACCCAATAAGATGCTGCCAGCAATTCTCAAGCCAGATGTGACTGCGCCTGGTGTGGACATACTTGCTGCCTACTCAGAATTCGCAAGTGCATCAACCTTGCTAACAGACAATCGTCGTGGATTTAAATTCAACGTAATGCAAGGAACTTCTATGTCTTGCCCTCATGTTACTGGCATTGCTGGACTTATCAAAACACGTTATCCTAAATGGAGCCCTTCTGCTATAAAGTCAGCAATCATGACCACAGCAACCACACTTGACAACACTAAAAGAAAAATACATGACGGGTTTGTGAAAACAGTGGCAGATCCCTTTGCTTATGGTTCAGGACATGTGCAACCTGATCTTGCCATAGATCCTGGCCTTGTTTACGATCTAGGCCTCACTGATTACTTGAACTTCTTATGCGCTTCTGGATACAACCAACAACTCATTTCTGCTCTCAATTCCCATAAAACTTTCATTTGTTCAGGCACTCACAGTGTAACAGATTTGAACTACCCTTCAATCACATTGCCAAATCTAGGCTTAAAACCCGTAACCATTACTCGCACAGTAACAAATGTTGGAACACCAAGCACATACACTGCCAGCGTCCAATTGCTTGGATATAACATTAGCGTTGTGCCAAGTTCCTTGACTTTCAGCAAAACTGGTGAAAAGAAGACATTCAAGGTGACTGTGCAGGCAAGCAGTGAAACAAAGCGGAGAACCTATGAATTTGGGGAATTGCGATGGACAGATGGAAAACATATAGTAAGGAGTCCTATTACAGTAAAGCGCAGATAA 2385 0.4465 MGRSIFLLQLILSSFLLFIFFLEAVPATRKLYIVYLGAHSHGANPTSVDLQIATDSHYNLLTSVLGSEEKAKEAVIYSYNRHINGFAAMLEEEEAADIGKNPNVVSVFLSKKHKLHTTRSWEFLGLHRNGKNSAWQKGNFGENTIIANIDTGVWPESESFSDEGYGPVPSKWRGGNVCQFNKFLSNKTNLCNRKLIGARFFNKAYEAYNGPLVARLQTARDLMGHGTHTLSTAGGNFVPGASVFAVGNGTAKGGSPRARVAAYKVCWDLADPSGCYGADMLSAIDQAIDDGVDLINLSVGGFHDVSPEGILTDEVSIGAFHAISNNILLVASAGNDGPDSGSVVNVAPWVFTIAASTIDRDFSSTLIINNNQQIEGASLFVDLPPNQAFSLILSTDAKLPTATFRDAQLCRAGTLDPRKVNGKIVSCSREKIKSVVEGQEAKSAGAKGMVVRNQPQQGTTLEAEPHVFTAVGAPAPHPPPKPKKITKHTTFTEFQIADTDPFKSGATIKMSPARTLFGRKPAPVMASFSSRGPNKMLPAILKPDVTAPGVDILAAYSEFASASTLLTDNRRGFKFNVMQGTSMSCPHVTGIAGLIKTRYPKWSPSAIKSAIMTTATTLDNTKRKIHDGFVKTVADPFAYGSGHVQPDLAIDPGLVYDLGLTDYLNFLCASGYNQQLISALNSHKTFICSGTHSVTDLNYPSITLPNLGLKPVTITRTVTNVGTPSTYTASVQLLGYNISVVPSSLTFSKTGEKKTFKVTVQASSETKRRTYEFGELRWTDGKHIVRSPITVKRR* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0947 794 CDD PA_subtilisin_like 365 471 - -
Vra4g0947 794 Gene3D - 667 793 - -
Vra4g0947 794 PANTHER SUBTILISIN-LIKE PROTEASE GLYMA18G48580 21 792 - -
Vra4g0947 794 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 792 IPR045051 -
Vra4g0947 794 ProSitePatterns Serine proteases, subtilase family, serine active site. 580 590 IPR023828 -
Vra4g0947 794 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Vra4g0947 794 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Vra4g0947 794 PRINTS Subtilisin serine protease family (S8) signature 579 595 IPR015500 -
Vra4g0947 794 Pfam Subtilase family 141 627 IPR000209 GO:0006508|GO:0008236
Vra4g0947 794 ProSiteProfiles Serine proteases, subtilase domain profile. 120 650 - -
Vra4g0947 794 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 116 IPR037045 -
Vra4g0947 794 SUPERFAMILY Subtilisin-like 115 654 IPR036852 GO:0004252|GO:0006508
Vra4g0947 794 Gene3D Peptidase S8/S53 domain 144 663 IPR036852 GO:0004252|GO:0006508
Vra4g0947 794 Gene3D - 359 517 - -
Vra4g0947 794 CDD Peptidases_S8_3 113 616 IPR034197 -
Vra4g0947 794 Pfam Fibronectin type-III domain 696 791 IPR041469 -
Vra4g0947 794 Pfam Peptidase inhibitor I9 32 116 IPR010259 -
Vra4g0947 794 Pfam PA domain 410 466 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0947 Vra-Chr4 16481236 16486192 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0947 32 792 Subtilisin-like Serine Gene Family AT2G04160 50.978 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0947 - - gmx:100813564 1180.62