Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0944 ATGGGCAGCTCCGTTTTTCTTCTCCGTCTTATTATAGTTTCCTCGTTTCTTATTTTCACTTTCTTTCTTGAAGCTGTTCATGGCAGCAAAAAGTGTTACATTGTATACTTGGGAACTCACTCTCATGGTTCCAACCCTACTTCTGTTGACCTCCAAATTGCTACGTATTCTCATTATGATTTACTAGCTTCAATCTTGGGAAGTGAGGAGAAAGCAAAAGAAGCAGTTCTTTACTCATACAACAGACACATAAATGGGTTTGCAGCAATGCTGGAAGAGGAAGAAGCAGCAGATATTGGCAAAAACCCTAACGTGGTGTCAGTGTTCTTGAGCAAAAAACATAAACTGCACACTACCCGCTCATGGGAGTTTCTTGGACTACACATAAATGGTAAGAACTCTGCATGGCAAGAGGGAAGCTTTGGTGAAAATACAATAATTGCAAACATCGACACAGGTGTTTGGCCAGAGTCAGAGAGCTTCGGTGATGAAGGATATGGTCCTGTTCCCTCCAAATGGCGTGGTGGTAATGTTTGTCAAATTAACAAACTTCCACGATCCAAGACAAATCCATGCAACAGAAAGCTGATAGGAGCAAGATTCTTCAATAAAGCTTTTGAGGTCTACAATGGCGAACTTGTTCCCTCAATGCAAACAGCGCGTGACTTCATGGGGCATGGTACCCACACTCTATCAACCGCTGGAGGCAATTTCGTGGGAGGCGCAAGCGTATTTGCGGTGGGTAATGGCACCGCAAAGGGTGGGTCCCCGAGAGCACGAGTTGCGGCGTACAAAGTGTGTTGGTCTCTGACAGACCCAGCCGGTTGTTACGGCGCCGACGTATTGGCTGCTATCGACCAAGCCATCGACGACGGCGTCGACGTCATCAATCTTTCAGCTGGTGGTAGTTACGTCGCCAGTCCCGAAGGAATATTCACTGACGAAGTCTCGATTGGAGCCTTTCATGCTATTTCAAGAAACATACTTTTAGTTGCTTCTGCAGGGAACGATGGACCAACTCCTGGTTCTGTGGTGAATGTGGCCCCTTGGGTGTTCACCATTGCTGCTAGCACCATAGACAGATATTTCAGCAGTAATTTAATCATTAACGACAATGAAGTAATCGAGGGAGCGAGTCTTTTTGTAAACTTGCCACCGAACCAGGACTTTTCTTTGATCCTTTCCACTGATGCTAAGCTTCCCAATGCAACATTTCGAGACGCTGAACTGTGTAAGCGTGGAACACTTGATCCTGAAAAAGTAAAGGGAAAAATAGTGCGTTGTATTCGAGGTGGAAAGATAAAATCAGTTGCTGAGGGTAATGAAGCTCTTTCTTCAGGCGCACAGGGAATGATTTTGCGCAATCAAAAGCGAAATGGGAAAACAACTTTTGGCGAGCCTCATGTTCTCTCCACTGTGGGCACAAATGATGACCATGCAGGAGCACAACCTGATTTTTACTTAACTGCAACGGACACTATAAAATCAGATACTACCATAAGAATGACCCCAGCAAGGACGTTATTTGGAAGAAAGCCAGCTCCAATTATGGCTTCATTCTCATCTAGAGGACCCAATAAGATTCAGCCATCAATACTGAAGCCTGATGTGACTGCACCTGGTGTGAACATACTTTCTGCCTTCTCAGAATTCGCAAGTGCATCAAACTTGCCAACAGACAATCGTCGTGGGTTTAAATTCAACGTAATGCAAGGTACTTCTATGTCTTGCCCTCATGTTGCTGGCATCGCTGGACTTCTCAAAACACGTCATCCTAGTTGGAGTCCTGCCGCTATAAAATCAGCAATCATGACCACAGCAACCACACTTGACAACACAAACAGGCCAATACAGGATGCATTTGCTAAAACATTGGCAACTCCTTTTGCTTATGGTTCAGGACATGTTAAACCCGACCTTGCCATAGATCCTGGCCTTGTTTACGATCTAGGCCTCACTGATTACTTGAACTTCTTATGCGCTTCTGGATACGACCAACAACTCATTTCTTCTCTCAATTTCAAAACAACTTTCATTTGTTCAGGCACTCACAGTGTGACAGATTTGAACTACCCTTCAATCACATTGCCAAGTCTAGGCTTAAAACCCGTAACCGTTACTCGCACAGTAACAAATGTTGGAATATCAAGCACATACGCTGCAACTGCTCAATTACCTGGATATAACATTACCGTTGTGCCAAATTCCTTGACTTTCAATAAAATTGGTGAAAAGAAGACATTCAAGGTGACTGTGCAGGCAAGCAGTGTAACTAAGCGGAGAACTTATCAATTTGGAGAATTGCGATGGACAGATGGAAAACATATAGTAAGGAGTCCTATTACAGTAAAGCGCAGATGA 2361 0.4413 MGSSVFLLRLIIVSSFLIFTFFLEAVHGSKKCYIVYLGTHSHGSNPTSVDLQIATYSHYDLLASILGSEEKAKEAVLYSYNRHINGFAAMLEEEEAADIGKNPNVVSVFLSKKHKLHTTRSWEFLGLHINGKNSAWQEGSFGENTIIANIDTGVWPESESFGDEGYGPVPSKWRGGNVCQINKLPRSKTNPCNRKLIGARFFNKAFEVYNGELVPSMQTARDFMGHGTHTLSTAGGNFVGGASVFAVGNGTAKGGSPRARVAAYKVCWSLTDPAGCYGADVLAAIDQAIDDGVDVINLSAGGSYVASPEGIFTDEVSIGAFHAISRNILLVASAGNDGPTPGSVVNVAPWVFTIAASTIDRYFSSNLIINDNEVIEGASLFVNLPPNQDFSLILSTDAKLPNATFRDAELCKRGTLDPEKVKGKIVRCIRGGKIKSVAEGNEALSSGAQGMILRNQKRNGKTTFGEPHVLSTVGTNDDHAGAQPDFYLTATDTIKSDTTIRMTPARTLFGRKPAPIMASFSSRGPNKIQPSILKPDVTAPGVNILSAFSEFASASNLPTDNRRGFKFNVMQGTSMSCPHVAGIAGLLKTRHPSWSPAAIKSAIMTTATTLDNTNRPIQDAFAKTLATPFAYGSGHVKPDLAIDPGLVYDLGLTDYLNFLCASGYDQQLISSLNFKTTFICSGTHSVTDLNYPSITLPSLGLKPVTVTRTVTNVGISSTYAATAQLPGYNITVVPNSLTFNKIGEKKTFKVTVQASSVTKRRTYQFGELRWTDGKHIVRSPITVKRR* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0944 786 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Vra4g0944 786 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Vra4g0944 786 PRINTS Subtilisin serine protease family (S8) signature 571 587 IPR015500 -
Vra4g0944 786 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 117 IPR037045 -
Vra4g0944 786 Gene3D - 360 509 - -
Vra4g0944 786 Gene3D Peptidase S8/S53 domain 145 655 IPR036852 GO:0004252|GO:0006508
Vra4g0944 786 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 784 IPR045051 -
Vra4g0944 786 Pfam Subtilase family 142 613 IPR000209 GO:0006508|GO:0008236
Vra4g0944 786 Gene3D - 659 785 - -
Vra4g0944 786 CDD PA_subtilisin_like 366 473 - -
Vra4g0944 786 Pfam Peptidase inhibitor I9 33 117 IPR010259 -
Vra4g0944 786 ProSitePatterns Serine proteases, subtilase family, serine active site. 572 582 IPR023828 -
Vra4g0944 786 SUPERFAMILY Subtilisin-like 116 646 IPR036852 GO:0004252|GO:0006508
Vra4g0944 786 ProSiteProfiles Serine proteases, subtilase domain profile. 121 642 - -
Vra4g0944 786 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 20 784 - -
Vra4g0944 786 CDD Peptidases_S8_3 114 608 IPR034197 -
Vra4g0944 786 Pfam Fibronectin type-III domain 688 783 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0944 Vra-Chr4 16454578 16459381 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0944 33 784 Subtilisin-like Serine Gene Family AT2G04160 51.842 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0944 - - gmx:100813564 1277.31