Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0942 ATGAAAAGAATGAGTGGCTCCATTTTTTACCTTCATCTTCTTCTTTCATCTTTCGTTATTTTCACTTTGTTGTTGAATGCTGTCCATGCCAGTAAAAAGTGCTACATTGTGTACTTGGGAGCACATTCTCATGGTCCAAACCCTTCATCTCTTGACCTTGAAACAGCCACACATTCCCATTATGATTTACTGGGTTCGATCTTGGGAAGCCATGAAAAGGCCAAAGAAGCAATTATTTACTCGTATAACAAACACATCAATGGCTTTGCAGCTGCACTTGAAGAGAAAGAAGCAGCATATATTACAAAAAACCCAAACGTAGTCTCTGTGTTTTTGAGCAAAGAGCATAAACTGCACACAACCCGTTCGTGGGAATTTCTTGGACTGCAAAGAAATGGTATCAACTCAGCATGGCAAAGAGGGAGATTTGGTGAGAATACAATCATCGGTAACATCGACACAGGTGTCTGGCCTGAGTCCAAGAGTTTTACAGACAGGGGCTTGGGTCCTGTCCCTGCAAAATGGCGTGGGGGCAATGTCTGTCAAATCCGAGGTTCAAACAAAGTTCCATGTAACAGGAAACTAATTGGAGCAAGGTTCTTCAACAAAGCTTACGAAGCATTCAACGGTCAACTTCCCCGATCACAACAAACAGCCCGTGACTTTGTGGGGCATGGCACGCATACTCTATCAACAGCAGGAGGGAATTTTGTGGGAGGTGCGAGTGTATTTGGCAATGGCAATGGCACAGCAAAGGGTGGCTCCCCAAGAGCTCGAGTTGCAGCCTACAAAGCGTGTTGGTCTCTCACTGATGCAGCTAGTTGTTTTGGTGCTGATGTCTTAGCTGCTATTGACCAAGCCATAAGTGATGGTGTTGACATTATCTCTGTCTCTGTTGGAGGCCGAACCAGTCTCAGTGCTGAAGAAATATTCACCGATGAGGTTTCCATTGGAGCATTCCATGCACTTGTGAAAAATATTCTCGTGGTTGCGTCTGCAGGGAACGATGGACCAACACCTGGAACTGTTATCAACGTGGCTCCTTGGCTATTCACAATTGCAGCTAGCACACTAGATAGGGACTTCAGCAGTACCTTAACTTTTGGAAACAATCAGCAAATTACGGGAGCCAGTCTTTTTGTAAACATACCACCTAACCAGTCTTTTTCTCTGATCCTCGCTACTGATGCTAAATTTCCCAATGTCACAAATCGAGACGCTCAACTTTGTAAGGCTGGGACACTGGATCCTAGAAAAGTAAATGGCAAAATAGTGTCATGCATTCGAGAGGGAAAAATAAAATCAGTTGCTGAGGGTAATGAAGCTCTATCTGCAGGAGCCAGTGGAATGATTTTGGGCAATCAAAAGCAAAATGGGAACACACTTCTAGCCGAGCCTCATGTTTTGTCCACTGTCACCTACCCTCCAGACCATCTAGTAACAAAGCCTGGTTTTCTCATAAGTGCCACGGACGACACGATAAACTCGAATACGACAATAAGGGTGTCTTCAGCAAGAACATTGCTAGGAAGAAAGCCAGCTCCAGTTATGGCTTCATTCTCATCAAGGGGACCCAATAAGATTCAGCCATCAATACTCAAGCCCGATGTAACTGCTCCTGGTGTGAACATACTTGCTTCGTATTCACTATTTGCAAGTGCTTCTAACTTGCCTTCAGACACACGTAGAGGGTTTCCATTCAATGTAATGCAAGGAACTTCCATGTCTTGCCCTCATGTTGCTGGCATTGCTGGACTAATCAAAACACTTCATCCTGATTGGAGTCCAGCTGCTATTAAGTCAGCAATTATGACAACAGCAAGCACAAGAGATAACACCAACAGAACAATAAGGGATGCGTTTGATAAAAAATTGGCAAACCCTTTTGCTTATGGTTCAGGACATGTGCAACCAAACTCTGCAATAGATCCCGGACTTGTTTATGATCTAAGCCTCGTCGATTACTTGAACTTCCTATGTGCTTCCGGATACGACCAAGAACTCATTTCGGCACTCAATTTCAACAAAAGATTCATTTGTTCAGGCAGTCACAGCATAACAGACTTGAACTACCCTTCAATCACATTGCCAAATCTGGGGTTAAAAGCCGTAACTGTTACTCGCACCATCACCAATGTTGGGCCACCAAGCACATATTTTGCAAAAGCTCAATTACATGGATACACCATAGTTGTTGTACCCAATTCCCTGACTTTCACGAAAATTGGTGAAAAGAAGACATTCAGGGTTGTTGTACAGTCTACAAGTGGAACTAAGAGGGGAAATTATAATTTTGGGGAATTGCTTTGGACGAATGGAAAACACAACGTTAGAAGTCCAATTACAGTTCGGCGCAAATGA 2361 0.4363 MKRMSGSIFYLHLLLSSFVIFTLLLNAVHASKKCYIVYLGAHSHGPNPSSLDLETATHSHYDLLGSILGSHEKAKEAIIYSYNKHINGFAAALEEKEAAYITKNPNVVSVFLSKEHKLHTTRSWEFLGLQRNGINSAWQRGRFGENTIIGNIDTGVWPESKSFTDRGLGPVPAKWRGGNVCQIRGSNKVPCNRKLIGARFFNKAYEAFNGQLPRSQQTARDFVGHGTHTLSTAGGNFVGGASVFGNGNGTAKGGSPRARVAAYKACWSLTDAASCFGADVLAAIDQAISDGVDIISVSVGGRTSLSAEEIFTDEVSIGAFHALVKNILVVASAGNDGPTPGTVINVAPWLFTIAASTLDRDFSSTLTFGNNQQITGASLFVNIPPNQSFSLILATDAKFPNVTNRDAQLCKAGTLDPRKVNGKIVSCIREGKIKSVAEGNEALSAGASGMILGNQKQNGNTLLAEPHVLSTVTYPPDHLVTKPGFLISATDDTINSNTTIRVSSARTLLGRKPAPVMASFSSRGPNKIQPSILKPDVTAPGVNILASYSLFASASNLPSDTRRGFPFNVMQGTSMSCPHVAGIAGLIKTLHPDWSPAAIKSAIMTTASTRDNTNRTIRDAFDKKLANPFAYGSGHVQPNSAIDPGLVYDLSLVDYLNFLCASGYDQELISALNFNKRFICSGSHSITDLNYPSITLPNLGLKAVTVTRTITNVGPPSTYFAKAQLHGYTIVVVPNSLTFTKIGEKKTFRVVVQSTSGTKRGNYNFGELLWTNGKHNVRSPITVRRK* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0942 786 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Vra4g0942 786 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Vra4g0942 786 PRINTS Subtilisin serine protease family (S8) signature 571 587 IPR015500 -
Vra4g0942 786 Gene3D - 359 509 - -
Vra4g0942 786 SUPERFAMILY Subtilisin-like 118 646 IPR036852 GO:0004252|GO:0006508
Vra4g0942 786 Pfam Fibronectin type-III domain 688 783 IPR041469 -
Vra4g0942 786 Gene3D - 659 785 - -
Vra4g0942 786 Gene3D Peptidase S8/S53 domain 147 655 IPR036852 GO:0004252|GO:0006508
Vra4g0942 786 CDD Peptidases_S8_3 116 608 IPR034197 -
Vra4g0942 786 ProSitePatterns Serine proteases, subtilase family, serine active site. 572 582 IPR023828 -
Vra4g0942 786 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 784 IPR045051 -
Vra4g0942 786 Pfam Peptidase inhibitor I9 35 119 IPR010259 -
Vra4g0942 786 CDD PA_subtilisin_like 365 472 - -
Vra4g0942 786 Pfam Subtilase family 144 614 IPR000209 GO:0006508|GO:0008236
Vra4g0942 786 ProSiteProfiles Serine proteases, subtilase domain profile. 123 642 - -
Vra4g0942 786 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 119 IPR037045 -
Vra4g0942 786 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 22 784 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0942 Vra-Chr4 16443620 16448627 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0942 22 784 Subtilisin-like Serine Gene Family AT5G59810 53.117 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0942 - - gmx:100803751 1392.1