Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0918 ATGGATGCTGAACATCTTGAGAGTAGTGTAATATCTGGGTTCCAACTGGCCACTTCAGCCGGACCCTTGTGCGAGGAACCTATGTGGGGTTTGGCATTTGTTGTTGAGGCTCGCATATCTCCATTTTCAGGGCATGGTGATGAATCTGAAACGCCCCAGCAATCTGAGCAGTATGGCATCTTTGCAGGGCAGGTAATAGCAACTGTCAAAGATGCATGTAGAGCAGCTATGCTTCAGAATAAGCCACGGCTTGTAGAAGCAATGTACTTCTGTGAATTGAATACACCTACTGAATATTTGGGTCCTATGTATGCTGTACTTTCCCGAAGAAGGGCCCGAATTTTGAAGGAAGAGACACAAGGAAGACAACCATGCCTTGCTGCAACTTCTACTGTTAAAGGACACCTTTCTAATATTGACGATAGCCTTTCTGTCCGAAACTTACAGGCAAGTCACTATGTGTAA 465 0.4516 MDAEHLESSVISGFQLATSAGPLCEEPMWGLAFVVEARISPFSGHGDESETPQQSEQYGIFAGQVIATVKDACRAAMLQNKPRLVEAMYFCELNTPTEYLGPMYAVLSRRRARILKEETQGRQPCLAATSTVKGHLSNIDDSLSVRNLQASHYV* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0918 154 PANTHER - 2 138 - -
Vra4g0918 154 Gene3D - 2 80 IPR014721 -
Vra4g0918 154 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 2 138 - -
Vra4g0918 154 SUPERFAMILY EF-G C-terminal domain-like 86 122 IPR035647 -
Vra4g0918 154 SUPERFAMILY Ribosomal protein S5 domain 2-like 5 85 IPR020568 -
Vra4g0918 154 Gene3D - 82 144 - -
Vra4g0918 154 CDD aeEF2_snRNP_like_IV 5 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0918 Vra-Chr4 16228762 16229226 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0918 2 120 Eukaryotic Initiation Factors Gene Family AT3G22980 67.227 3.14e-50 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0918 K14536 - vra:106758434 310.457