Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0915 ATGCAAGCCTCCTCCTCCATCTTCATCTTCTTGTTGTTGTTGTTTTTGTCATGTGCATTGTCTTCTTCAAAACTATTGTTGTTCAACAGAAGGGTCCTCCATGAACCCTTTATTCCTTTGACCTCTCTTCCTCCTTCTGAACCACCAAAACCACCACCTCCTCATCCTTCTCCTTCTCCTTCTCCTTCAACCTCAAAACAAAAACCCAAATACCCTTCATCATCCATCATCCCCACAACCACCATTTCCTCCACACCAGTACCAACAACCACTACAACCACAACACCAACCCCAACAACAACACAATCACCATTTTTCCCCTTATACCCTTCTTCTCCTCCTCCTCCTTCTCCGATCACCTTTGCCTCCTTTCCTGCCAATATCTCCTCCCTCATTCTCCCTCACTCCCCAAAACCCAATTCCTCCTCCAACAAACTTCTTCCCGTCGCTCTCGCCGCCGTTCTCGCTGCCGCACTCGTCGTCTCCATCTCTGCCTTCGTCTGTTACCGCCGCCAACGGAACCCTCCCCCCTCCCCAGCAGCCAAAGTTCTCCGTTCCAACACTGACCTCCTCCCGCTCCGCCGCAATGCCGAAACTTCCGTCGAAACACGCAAGCTCCGGCACACGTCCTCCACCAGCTCCGAGTTTCTCTACCTCGGCACTGTCGCGAACTCTCACACGATCGACGACGCCGACGTTGGCGACGGAGACCGGAAAATGGAATCCCCGGAGCTCCGGCCACTTCCGCCGCTCGCGCGACAAGCTTCAGTTCCGCCCCCGCCTCCACCCCGCGACGAGGCGGGTTTCACGACAGCGGAGGAGGACGAAGACGAATTTTACTCGCCGAGAGGTTCGTCGTTGGGAGGCTCCGGCGGAACCGGATCAGTTTCCAGGCGAGTGTTCGCCGTCGACCGAAGCGTGACCTCTAGCTCGTGTTCTTCCTCTTCTGGGTCGCCGGAAAGGTCTATCCTGAACATGCCGCCGCCGGCGAGTTCGAGTTATCGGAACACGCTGCCGAAATCACCGGAAAATTACAACCACCAGCACGTGCATTCTTCTTCTTCGCTGTGCTCAACACCTGATAGGGTTTTTGCTGAACGTGATAACAATGTGTTAAGTGCATGTGTACATGCACATGCAGCACCATCATCATCGCATGAGGGAACGTTGGAGAAAAATGAAAATACATTACCTTCATCTCCACCACCGAGATTATCTGATGCTTCTTCGTCTTCCGCTTTTTCTCTTCCCTCTTCGCCGGAGAAGGTGACACGTCACCATACTTTCGATCAGTCTCCGAGAATGTCGAGTGTTTCCGACGGACTAATGTTACCCGGCTTGTCATCGGTGCCTTTATCACCCGCCTTGCTTTCATCGCCGGAAACCGAAAGAGGAACTTTCAGTGAATTGGGAACAAGTTCTTTTGGTGCGCAGAGAAAACACTGGAGCATTCCAGCACTGTCAATGCCAATAACAACACCATTTGATGAAATTGGAAGCTTCCCAGGTCCTCCACCTTTGCCACAGAGGAAACACTGGGAGATTCCAGGCACTGCTCCGCCACCACCACCACCGCCGTTGCCACGGCAGAGGAAGCAGTGGGGAGTTCCAGCCCCAGGGCCGTCAACACCGGTTGGTCAACCGGTGTCAAGGCCACCTGAATTGGTGCCTCCTTCGAGGCCTTTTGTGTTGCAAAACCAAGCAACCAATGTTGAGTTGCCGGCGAGTTTGAGGGAAATTGAAGACACTGGTAAACCAAAACTGAAGCCCCTGCATTGGGACAAAGTGAGAACAAGCTCTGAACGTGAAATGGTGTGGGATCAGATCAAGTCCAGTTCGTTTAAATTGAATGAGAAAATGATTGAAACGTTGTTTGTAGTGAACACACCAAACCCTAAGGCCAAGGATGCAACTACAAACTCTATTTCTCACCCGCCAAATCAGGAGGAAAGAGTACTCGATCCTAAAAAGTCTCAAAATATTTGTATCTTGCTGAAAGCGCTTAACATCACTATAGAAGAAGTGTGTGAAGCACTTTTACAAGGTACTACTGATACACTTGGGACAGAATTACTCGAAAGCTTATTAAGAATGGCACCAAGCAAGGAAGAAGAACGTAAGTTGAGGGAACATAAAGATGACTCACCATCCAAGCTTGGTCTGGCTGAGAAATTTTTGAAGGCAGTGCTTGATGTACCTTTCGCATTTAAAAGGATTGAGGCAATGCTTTTCATAGGCAGTTTTGAGTCTGAAGTGGATTATCTCAGGACATCCTTTCAAACACTAGAGGCTGCCTGTGAAGAGCTGCGACATTCCAGAATGTTCTTGAAGCTGTTGGAGGCTGTACTTAAAACTGGGAACCGCATGAACGTGGGGACCAACCGTGGGGATGCAGAGGCATTCAAACTTGATACTCTTCTCAAGCTGGCTGATGTCAAAGGTGCAGATGGAAAAACCACTCTATTGCATTTTGTTGTACAAGAAATTATTCGAACCGAAGGTGCACGTCTCTTTGACACTAATCAAACTCCAAGCTCTACTACTCTGAACGAAGATGTCAAGTGTAGGAGGCTTGGTCTACAAGTTGTATCAAGCCTGAGTTCAGAGCTATCAAATGTGAAGAAGGCTGCTACTATGGATTCTGAAGTTCTAAGCAGTGATGTGTTAAAACTTTCCAAAGGAATTGCAAACATAGCAGAAGTTGTGCAGTTAAACCAAACCATGGGGTCAGATGAAAGCGGTCAGAATTTTACAGAATCAGTGAAGAAATTCATCAGAATGGCTGAGGAGGAAATTCCAAAAATTCAAGCCCAAGAAAGTGTTGCTTCCTCCCTTGTGAAGGAGATAACAGAATATTTTCATGGGAACTTGTCAAAAGAAGAAGCTCATCCATTCAGGCTCTTCATGGTTGTAAGAGACTTTCTAGCAGTTCTAGACCGTGTCTGCAAAGAAGTTGGAATGATAAATGAGAGAACCATGGTTAGTTCAGCTCATAAATTCCCTGTGCCAGTTAACCCAATGCTTCCACAACCCCTTCCTGGATTACATGAGAGCCACCAATATAATAATAATAATAATAATAATGACAATACCTCTTCAGATGATGAGGCTCCATCACCTTAG 3123 0.4813 MQASSSIFIFLLLLFLSCALSSSKLLLFNRRVLHEPFIPLTSLPPSEPPKPPPPHPSPSPSPSTSKQKPKYPSSSIIPTTTISSTPVPTTTTTTTPTPTTTQSPFFPLYPSSPPPPSPITFASFPANISSLILPHSPKPNSSSNKLLPVALAAVLAAALVVSISAFVCYRRQRNPPPSPAAKVLRSNTDLLPLRRNAETSVETRKLRHTSSTSSEFLYLGTVANSHTIDDADVGDGDRKMESPELRPLPPLARQASVPPPPPPRDEAGFTTAEEDEDEFYSPRGSSLGGSGGTGSVSRRVFAVDRSVTSSSCSSSSGSPERSILNMPPPASSSYRNTLPKSPENYNHQHVHSSSSLCSTPDRVFAERDNNVLSACVHAHAAPSSSHEGTLEKNENTLPSSPPPRLSDASSSSAFSLPSSPEKVTRHHTFDQSPRMSSVSDGLMLPGLSSVPLSPALLSSPETERGTFSELGTSSFGAQRKHWSIPALSMPITTPFDEIGSFPGPPPLPQRKHWEIPGTAPPPPPPPLPRQRKQWGVPAPGPSTPVGQPVSRPPELVPPSRPFVLQNQATNVELPASLREIEDTGKPKLKPLHWDKVRTSSEREMVWDQIKSSSFKLNEKMIETLFVVNTPNPKAKDATTNSISHPPNQEERVLDPKKSQNICILLKALNITIEEVCEALLQGTTDTLGTELLESLLRMAPSKEEERKLREHKDDSPSKLGLAEKFLKAVLDVPFAFKRIEAMLFIGSFESEVDYLRTSFQTLEAACEELRHSRMFLKLLEAVLKTGNRMNVGTNRGDAEAFKLDTLLKLADVKGADGKTTLLHFVVQEIIRTEGARLFDTNQTPSSTTLNEDVKCRRLGLQVVSSLSSELSNVKKAATMDSEVLSSDVLKLSKGIANIAEVVQLNQTMGSDESGQNFTESVKKFIRMAEEEIPKIQAQESVASSLVKEITEYFHGNLSKEEAHPFRLFMVVRDFLAVLDRVCKEVGMINERTMVSSAHKFPVPVNPMLPQPLPGLHESHQYNNNNNNNDNTSSDDEAPSP* 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0915 1040 SMART it6_source 578 993 IPR015425 -
Vra4g0915 1040 Pfam Formin Homology 2 Domain 582 978 IPR015425 -
Vra4g0915 1040 MobiDBLite consensus disorder prediction 230 244 - -
Vra4g0915 1040 MobiDBLite consensus disorder prediction 66 106 - -
Vra4g0915 1040 SUPERFAMILY Formin homology 2 domain (FH2 domain) 520 990 - -
Vra4g0915 1040 PANTHER FORMIN-RELATED 8 1027 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vra4g0915 1040 MobiDBLite consensus disorder prediction 227 357 - -
Vra4g0915 1040 MobiDBLite consensus disorder prediction 386 422 - -
Vra4g0915 1040 MobiDBLite consensus disorder prediction 1008 1040 - -
Vra4g0915 1040 PANTHER FORMIN-LIKE PROTEIN 1 8 1027 - -
Vra4g0915 1040 MobiDBLite consensus disorder prediction 494 553 - -
Vra4g0915 1040 MobiDBLite consensus disorder prediction 381 442 - -
Vra4g0915 1040 MobiDBLite consensus disorder prediction 43 109 - -
Vra4g0915 1040 MobiDBLite consensus disorder prediction 302 357 - -
Vra4g0915 1040 MobiDBLite consensus disorder prediction 252 266 - -
Vra4g0915 1040 MobiDBLite consensus disorder prediction 1016 1040 - -
Vra4g0915 1040 ProSiteProfiles Formin homology-2 (FH2) domain profile. 578 1004 IPR015425 -
Vra4g0915 1040 Gene3D Formin, FH2 domain 579 987 IPR042201 -
Vra4g0915 1040 MobiDBLite consensus disorder prediction 499 532 - -
Vra4g0915 1040 MobiDBLite consensus disorder prediction 43 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0915 Vra-Chr4 16207232 16211786 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0915 526 996 FH2 protein (formin) Gene Family AT2G43800 55.602 1.30e-162 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0915 - - vun:114185313 1556.58