Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0898 ATGGGGTCCTGCTTCTCTGCGGAAAGCAGGAGCCCTCACCCCACTTCACCCTCTACATCTTTTAGGAAGCGCAAGAGCAACGCCAAGAAGAGGCTTGGATCAAGGGCTTCTTCCTTTGAGTATTGGAGGAATGAGCCTCTCCATAGGATCCCTGGGAGGATCTTCCTCAATGGCTCCTCCCAAGTTGCATCCTTGTTCACTCAGCAAGGCAAGAAGGGTACCAACCAGGATGCCATGGTGGTTTGGGAGAACTTTTGTTCTAGACAGGATACTATTTTCTGTGGAGTTTTTGATGGCCATGGTCCATATGGTCACATGGTTGCAAAAAGAGTGAGAGATTCTCTTCCTCTTAAACTGAATGCCCATTGGGAAGTTAATGTTCCCGGTGAGGAAGTCCTCAAGGAGATTAGCGTTAATGCTGCAGGAAGCATGAATATAGAAGAGACTGCCTCTGCATCTGCTGATGAGGATTCTCGGATATCTGTTGATGCTGAAGAAACAGAAAAACACCCTGAAATCTTTCAGACACTAAAGGAATCCTTTTTGACGGCATTCAAAGTTATGGATAGGGAACTGAAGACCCATCAAAGTATTGATTGTTTTTGTAGCGGAACAACAGCAGTAACTCTGATTAAGCAGGGCTATGATCTTATCGTTGGAAATGTGGGTGACTCTAGAGCTGTGTTGGGTACAAGAGAGAATGATGATTCTCTTGTCGCTGTCCAGTTAACTGTGGATCTGAAACCCAATCTTCCAGCTGAAGAAGAGAGAATTCGCAAATGTAAAGGCCGCGTTTTTGCTCTTCAGGATGAACCGGAAGTTGCTCGTGTCTGGTTGCCGAACAATGACTCGCCAGGCCTTGCCATGGCCAGGGCATTTGGTGATTTTTGTCTTAAAGATTTTGGCCTGATATCTGTTCCAGAGATGTCATACAGAAGACTCACCGAGAAAGACGAGTTCATTGTCTTAGCAACAGATGGGATTTGGGATGTTCTCTCAAACAAAGAAGTAGTGGACATAGTGGCAGCCACATCAAGGCGTGCCTCGGCCGCTCGAGCGCTGGTTGAGTCAGCAGTTCGCGCTTGGAGGTACAAGTATCCAACCTCCAAAGTGGATGACTGTGCTGTGGTTTGCCTCTTTTTGGACCCTGCCTCACACAAAGTATGCAGTGCTTCCATTGCCAAGTCCAAGGAGCAACCTGGTTCGGCTGTCCAAGTCCACAATGGCCACAATGGTGACAGGACCGGTCTGGCAAGGTCAGGAACATGCAGGGAGAGCGATGAAGGTGATGACACCAACAAGAATGAGGAGGAGAAAGAGACTAGGGAAGAGGAAATAGATCCTGAGTCAGAAATAGAATGGTCTGCTCTTGAAGGAGTGTCTCGTGTGAACACATTGCTAAACCTGCCAAGGTTTGAACCTGACAAAGAAGACAAGGGGATGAGAAAACAAAATTGA 1458 0.4719 MGSCFSAESRSPHPTSPSTSFRKRKSNAKKRLGSRASSFEYWRNEPLHRIPGRIFLNGSSQVASLFTQQGKKGTNQDAMVVWENFCSRQDTIFCGVFDGHGPYGHMVAKRVRDSLPLKLNAHWEVNVPGEEVLKEISVNAAGSMNIEETASASADEDSRISVDAEETEKHPEIFQTLKESFLTAFKVMDRELKTHQSIDCFCSGTTAVTLIKQGYDLIVGNVGDSRAVLGTRENDDSLVAVQLTVDLKPNLPAEEERIRKCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEMSYRRLTEKDEFIVLATDGIWDVLSNKEVVDIVAATSRRASAARALVESAVRAWRYKYPTSKVDDCAVVCLFLDPASHKVCSASIAKSKEQPGSAVQVHNGHNGDRTGLARSGTCRESDEGDDTNKNEEEKETREEEIDPESEIEWSALEGVSRVNTLLNLPRFEPDKEDKGMRKQN* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0898 485 MobiDBLite consensus disorder prediction 420 441 - -
Vra4g0898 485 PANTHER ALPHABET, ISOFORM E-RELATED 1 468 - -
Vra4g0898 485 CDD PP2Cc 61 381 IPR001932 -
Vra4g0898 485 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 468 - -
Vra4g0898 485 SUPERFAMILY PP2C-like 55 383 IPR036457 -
Vra4g0898 485 Gene3D - 57 382 IPR036457 -
Vra4g0898 485 MobiDBLite consensus disorder prediction 399 457 - -
Vra4g0898 485 MobiDBLite consensus disorder prediction 1 32 - -
Vra4g0898 485 ProSiteProfiles PPM-type phosphatase domain profile. 62 381 IPR001932 -
Vra4g0898 485 MobiDBLite consensus disorder prediction 1 22 - -
Vra4g0898 485 SMART PP2C_4 53 379 IPR001932 -
Vra4g0898 485 Pfam Protein phosphatase 2C 172 360 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0898 Vra-Chr4 16036498 16040954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0898 1 476 PP2C-type Phosphatase Gene Family AT3G02750 62.193 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0898 - - gmx:100790373 818.15