Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0892 ATGAGAGAAAATGATCTAAATGATGATCAGAACAACCTTTGTAATGAAGAAACAGAATCAAAAGGTGCGAAAAGAAGCCTGGCTGAGAGAAGAGGGTTCAATTCAGATGCTGCAAAAATCAATACAGCACTGTTTTGTAGTGACACTACAACAGACCCTTCCCCTTCTCCTGCTACTCATCTCACCATTCCTCCTGGAATCAGTCCCACTGCATTGTTGGATTCTCCTATTATGCTTCCAAATTCCCAGGCAACGCCATTATCTCCCACCACGGGGAGTTTCTTCGTGATGTCAACTCTTCCTCCCTATTCTGCTCCTCTAAATCAGGTTTCTAGTAATTTCCAGTCGGTAAAAGGAGGGAATAGAGAAAGCCAACTACCTCCTCAAGTTCAGTCACCATTAAATTTTTCATTCCCATCAGATTTTTCAAAAGGGCATATGAAAAATAGTGAAGTAAATTCATACAATGATATGAAAATGGTAAATGATAAGATTGTTAATGGCAATAATGTTGAGAAGCCAATCTCTGGTTCTGAAGAAGTAAGCGATGAAAGTGCTGTGCCCAAAAACGGTATCAATAGTGAAGATATTGTAGGACAAGCTGCTTCAGAAGGAGAACTGAAGGAAGCATCTCATGCAACAGGAGTGGTAAGAACCTCAGAGGATGGTTATAATTGGAGAAAATATGGACAAAAACAGGTAAAAGGTAGTGAGTATCCCAGAAGCTATTATAAATGTACACAACCTAATTGTCTGGTCAAGAAAAAGGTGGAACGATCACATGATGGTCAAATTACAGAAATCATCTACAAGGGTAATCATAACCATGTAAAACCACACTCTAGTCATAGAGGATCTGCACTTTCTACAGATGAGGTTTCAGACATGGCTGAAGAAGGTGCATTGGCTAAAGCTGATGGTGGGTTCATGTGGAAGAATATTCAGTCAGGAATAAAAGATTCAAAAAACAGTTTAGATTGGAAGGCTGATGGTCAGGAAAGGACATCACCAACTTCTGGTGTGACTGAGATTTCAGATCCTATATCAACCAACAAAGCTAAATCTCTATCCATGTTTGAATCGGAGGAGACTCCAGAGCTTTCTTCTACACTTGCTAGTCATGATATGGAAGAAGATGGAGCCACTCAAGCAATTGTTGAAGATGAAGTTGAGAATGATGAATCTGAACCTAAAAGAAGAAAGAAAGAGAACTATGCAGCTGAATCAAATTTGCCCCCTAGGTCTGTTCGTGAGCCAAGAGTGGTAGTCCAAATTGAGAGTGATGTGGACATACTTGATGATGGTTATCGCTGGCGTAAGTATGGACAGAAGGTTGTCAAAGGAAATCCAAATCCTAGGAGCTACTACAAATGCACAAGTGCTGGGTGTATGGTAAGGAAACATGTGGAAAGGGCCTCACACAATCTAAAATATGTTCTTACTACTTATGAGGGAAAACACAATCATGATGTGCCGACTGCAAGAACCAACAATCAGATAAACTCAAGTGATGGTGGTTTACACCCCAATGGTGTGAATGGGCAAGTGGCTCTTGCTTTAGCAGGGAGTGCTGGCATTAAGCCTGAGACTCATCAAACTCTTGCACATCATTTTGATAGAAAACCTGAATTCAGCAATGATTTTCTCAGGCCTAGTTTGATTGGAAGTTTCAGCAGTGACATGAAGTTTCCTCCTTCTTCCCTTTGCCAAATGAAGTATCCTTCCTTGAATAACACCATGCCTTATAGCTCCTATGGACTGAACCCTGATCGTTGTGCTGCACCTCAATCTGGATCCATTTCCTCAATGTTCCCTGATTTTCCAATGCCACTACCATTTAATCTTCCCTCATCTGGAAAATTTTCAATTGCTGGACTTAACTTTAACTGTGCCAAACCAATAAGTCCTATCCAATCTTTCCTTTCTGGACAGCAAGTGAAGGACATTGATACAGTATTTCTGAGGCCTAAGCAGGAACAGAAGGATGATACTATATATGGCTCCTGCATCCCCTCACTAGATCCAAATGCTTCACTCTCTTCTTCTTCAGCACCACCATCCATTTATCAACGAGTCATGCAAAATTTCCCTTCATAA 2097 0.4077 MRENDLNDDQNNLCNEETESKGAKRSLAERRGFNSDAAKINTALFCSDTTTDPSPSPATHLTIPPGISPTALLDSPIMLPNSQATPLSPTTGSFFVMSTLPPYSAPLNQVSSNFQSVKGGNRESQLPPQVQSPLNFSFPSDFSKGHMKNSEVNSYNDMKMVNDKIVNGNNVEKPISGSEEVSDESAVPKNGINSEDIVGQAASEGELKEASHATGVVRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQPNCLVKKKVERSHDGQITEIIYKGNHNHVKPHSSHRGSALSTDEVSDMAEEGALAKADGGFMWKNIQSGIKDSKNSLDWKADGQERTSPTSGVTEISDPISTNKAKSLSMFESEETPELSSTLASHDMEEDGATQAIVEDEVENDESEPKRRKKENYAAESNLPPRSVREPRVVVQIESDVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCMVRKHVERASHNLKYVLTTYEGKHNHDVPTARTNNQINSSDGGLHPNGVNGQVALALAGSAGIKPETHQTLAHHFDRKPEFSNDFLRPSLIGSFSSDMKFPPSSLCQMKYPSLNNTMPYSSYGLNPDRCAAPQSGSISSMFPDFPMPLPFNLPSSGKFSIAGLNFNCAKPISPIQSFLSGQQVKDIDTVFLRPKQEQKDDTIYGSCIPSLDPNASLSSSSAPPSIYQRVMQNFPS* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0892 698 MobiDBLite consensus disorder prediction 330 371 - -
Vra4g0892 698 MobiDBLite consensus disorder prediction 392 407 - -
Vra4g0892 698 MobiDBLite consensus disorder prediction 321 413 - -
Vra4g0892 698 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 98 673 - -
Vra4g0892 698 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 10 97 - -
Vra4g0892 698 MobiDBLite consensus disorder prediction 1 30 - -
Vra4g0892 698 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 10 97 IPR044810 GO:0003700
Vra4g0892 698 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 98 673 IPR044810 GO:0003700
Vra4g0892 698 MobiDBLite consensus disorder prediction 46 63 - -
Vra4g0892 698 ProSiteProfiles WRKY domain profile. 427 492 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra4g0892 698 SUPERFAMILY WRKY DNA-binding domain 425 492 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vra4g0892 698 ProSiteProfiles WRKY domain profile. 215 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra4g0892 698 SUPERFAMILY WRKY DNA-binding domain 218 279 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vra4g0892 698 MobiDBLite consensus disorder prediction 46 67 - -
Vra4g0892 698 SMART WRKY_cls 432 491 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra4g0892 698 SMART WRKY_cls 220 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra4g0892 698 Pfam WRKY DNA -binding domain 433 489 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra4g0892 698 Pfam WRKY DNA -binding domain 221 276 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra4g0892 698 Gene3D WRKY domain 419 485 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vra4g0892 698 Gene3D WRKY domain 208 280 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0892 Vra-Chr4 15972914 15976845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0892 22 495 WRKY Transcription Factor Family AT5G56270 40.234 4.44e-90 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vra4g0892 WRKY 7.2e-24 CL0274