Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0868 ATGGCTTCCCACATTGCTCTTCTTCGAGCCCCTCCTCTTTCAATTTCCACTCAACGCTTCCATGCAAAGCAAAGTTGCATAAACGGGCTCAAATTCGCCACTACCACCACCATTTCTTCTTCTTCTTCTTCTTGCTTTCCATGCTCCATAACAACACAGAGAGGGTCTTTTTCCTCAGTGATTGCTTGTTCCTCTTCAAATGGAAGAGACCCGGGTTCGGTGGATGATGAAGAGCTACAAAAGGAACTCATTGACGAAGAGAAACGACGAGCTGCATTGTTTGCGAGGATTGCCTCAGGGGAATTCACCGTGAGGCAAAAATCTCTTTTTCTTTCTACACTGGAGGGATTGGCAAAGGTGGGGGTGCCCAATGAAGTTCTGGAGTTTTTGTTTGGTTGGGTTGAAAGGGGTGGTGTGTACGCCAAAATTCCTGAGGCAAAAGGGTCAATCAAAGCTGTTCGAAGTGTGGCCTTCTTCATTCCCTTGTATGAACTTTACCTTACTTATGGTGGGATTTTTAGGTTGACGTTTGGACCAAAGTCCTTTCTGATAGTATCTGATCCGACTATTGCAAAACACATATTGAAAGACAATTCAAAGGCTTATTCAAAGGGCATCTTGGCTGAGATCCTAGACTTTGTAATGGGGAAAGGTCTCATCCCAGCTGATGGTGAAATATGGCGAGTTAGACGCCGTGCTATAGTCCCAGCATTGCACCAGAAGTATGTAGCAGCTATGATTGGCCTTTTTGGACAAGCCGCAGATAGGCTCTGCCAGAAGCTAGATGCTGCAGCATCCGATGGAGAAGACGCTGAGATGGAATCACTTTTCTCACGATTGACCCTGGATATCATTGGAAAAGCAGTATTCAATTATGATTTTGATAGTTTATCAAATGACACCGGTATAGTTGGGGCTGTTTATACTGTACTGAGAGAAGCAGAAGATCGAAGTGTTTCTCCAATTCCAGTATGGGATATCCCAATATGGAAAGATATATCACCACGTTTAAGGAAGGTTAATGAAGCTCTCAAATTGATCAACGATACGCTTGATGATCTGATAGCAATATGCAAGAGAATAGTGGATGAAGAAGAGTTACAGTTTCATGAAGAGTACATGAATGAAAAAGATCCAAGTATTCTACACTTCTTGTTAGCATCAGGAGATGATGTATCAAGTAAGCAACTTCGTGATGACTTAATGACCATGCTCATTGCTGGACATGAAACATCAGCTGCTGTTTTAACTTGGACCTTTTATCTACTATCCAAGGAGCCTAGAGTCATGTCCAAGCTCCAAGAAGAGGTTGATTCTGTACTTGGAGATAGACATCCAACTATTGAAGACATGAAGAAACTCAAATATACAACCCGAGTGATCAATGAGTCATTGAGGCTTTACCCGCAACCACCTGTGTTGATTCGTCGCTCTCTTGAGAATGATGTTCTTGGAGAGTACCCTATAAAGAGAGGTGAAGATATATTTATATCTATCTGGAACCTGCATCGCAGTCCAAAACTGTGGGATGATGCTGACAAGTTTGAGCCTGAAAGATGGCCATTAGATGGACCAAATCCTAACGAGACTAATCAAAGCTTCAAATATCTTCCGTTTGGAGGAGGACCACGGAAATGTGTAGGTGATTTGTTTGCTACGTACGAGACTGTAGTAGCTCTTGCAATGCTTGTTAGACGGTTCAACTTTCAAATGGCAATTGGAGCTCCACCTGTTGATATGACTACTGGAGCTACAATTCATACGACACAAGGCTTGAAGATGACTGTAACACACAGAATAAAACCTCCTATTGTACCATCATTACAGATGTCAACTTTGGAAGTGGATCCATCCGTAAGCCTTTCTGATCAGGATGAAATAAGTCAGAAAGGACAAGTTTATCAGGCTCAGGCTCAGCCCTAG 1923 0.4275 MASHIALLRAPPLSISTQRFHAKQSCINGLKFATTTTISSSSSSCFPCSITTQRGSFSSVIACSSSNGRDPGSVDDEELQKELIDEEKRRAALFARIASGEFTVRQKSLFLSTLEGLAKVGVPNEVLEFLFGWVERGGVYAKIPEAKGSIKAVRSVAFFIPLYELYLTYGGIFRLTFGPKSFLIVSDPTIAKHILKDNSKAYSKGILAEILDFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIGLFGQAADRLCQKLDAAASDGEDAEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVGAVYTVLREAEDRSVSPIPVWDIPIWKDISPRLRKVNEALKLINDTLDDLIAICKRIVDEEELQFHEEYMNEKDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPRVMSKLQEEVDSVLGDRHPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLENDVLGEYPIKRGEDIFISIWNLHRSPKLWDDADKFEPERWPLDGPNPNETNQSFKYLPFGGGPRKCVGDLFATYETVVALAMLVRRFNFQMAIGAPPVDMTTGATIHTTQGLKMTVTHRIKPPIVPSLQMSTLEVDPSVSLSDQDEISQKGQVYQAQAQP* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0868 640 MobiDBLite consensus disorder prediction 619 640 - -
Vra4g0868 640 PANTHER CYTOCHROME P450 FAMILY 4 106 602 - -
Vra4g0868 640 Gene3D Cytochrome P450 146 605 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g0868 640 Pfam Cytochrome P450 164 581 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g0868 640 PANTHER - 106 602 - -
Vra4g0868 640 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 539 548 IPR017972 GO:0005506|GO:0016705
Vra4g0868 640 PRINTS P450 superfamily signature 407 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g0868 640 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g0868 640 PRINTS P450 superfamily signature 537 546 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g0868 640 PRINTS P450 superfamily signature 546 557 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g0868 640 PRINTS E-class P450 group I signature 166 185 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g0868 640 PRINTS E-class P450 group I signature 280 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g0868 640 PRINTS E-class P450 group I signature 396 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g0868 640 PRINTS E-class P450 group I signature 416 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g0868 640 PRINTS E-class P450 group I signature 458 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g0868 640 PRINTS E-class P450 group I signature 498 522 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g0868 640 PRINTS E-class P450 group I signature 536 546 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g0868 640 PRINTS E-class P450 group I signature 546 569 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra4g0868 640 SUPERFAMILY Cytochrome P450 157 599 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0868 Vra-Chr4 15744021 15749854 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0868 68 622 Cytochrome P450 AT1G31800 79.501 0.0 900
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0868 K15747 - gmx:100780770 1148.27