Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0865 ATGGGAGCAGGTCAAATTGACCCTAACAAAGCACTTGATCCAGGTTTGATATATGATGCCACCCCACAGGACTACGTCAATCTCCTTTGTGCTTTGAATTACACACAAAAACAGATCTTAACCATTACAAGATCAGGTTCCTATAATTGTACTAAACCATCGTTTGATCTTAACTACCCTTCATTCATAGCTCTCTACAGCAACAAAACAAGGTCAGTCGTCCTCAAATTTAAGAGGACAGTGACCAATGTTGGAGATGGTGCTGCCATACACAGAGCCAAGGTGACAGAACCGAAGGGTTCTGTGCTGACAGTGTCACCTGAGACATTATCATTCAGATACAGAAATGAGAAGCTAAGCTACCATGTGCTGATAAAGTATAGCAAGTACAAGAAGGAAAATATCTCGTACGGTGATCTTGTTTGGATCGAAGATGGTGGAACACACAGTGTTAGGAGCCCCATTGTAGTGGCACCAAGTGGAATTGTATGA 492 0.4228 MGAGQIDPNKALDPGLIYDATPQDYVNLLCALNYTQKQILTITRSGSYNCTKPSFDLNYPSFIALYSNKTRSVVLKFKRTVTNVGDGAAIHRAKVTEPKGSVLTVSPETLSFRYRNEKLSYHVLIKYSKYKKENISYGDLVWIEDGGTHSVRSPIVVAPSGIV* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0865 163 Pfam Fibronectin type-III domain 56 157 IPR041469 -
Vra4g0865 163 PANTHER OS01G0868800 PROTEIN 1 158 - -
Vra4g0865 163 Gene3D Peptidase S8/S53 domain 1 25 IPR036852 GO:0004252|GO:0006508
Vra4g0865 163 Gene3D - 29 159 - -
Vra4g0865 163 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 158 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0865 Vra-Chr4 15723185 15723879 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0865 2 157 Subtilisin-like Serine Gene Family AT3G14240 41.566 3.93e-33 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0865 - - vra:106758427 330.872