Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0842 ATGGCCATCTCAGTACCCAGTAGGCAACTATTCATTGATGGAGAATGGAAAGTCCCCGTCCACAACAACCGGATTCCGATCATCAATCCCGCCACCGAAGATATCATAGGCGATATCCCTGCCGGTACCAAGGAAGATATTGACCTTGCTGTCGATGCTGCTAAAAGAGCCTTGTCCCGGAACAAAGGCAGAGATTGGTCATCAGCTTCTGCTTCTGTTCGTGCTGGTTATCTTCGAGCCATCGCTTCAAAGATAACGGAGAAAAAGGATGAACTGGGAAAGCTTGAAGCAATTGATAGTGGAAAACCACTAGATGAAGCACTGGCAGACCTGGATGATGTTATTGCTTGTTTTAACTACTATGCTGAGCTTGCAGAAGGGTTGGATGCAAAGCAAAAGGCTCCTGTATCCCTCCCTATGGAAACTTTCAAGAGTTATATTCTCAAGGAGCCCATTGGGGTTGTTGCATTAATTACTCCATGGAACTATCCTCTCTTAATGGCTACATGGAAAGTTGCTCCTGCTCTGGCTGCTGGTTGTGCTGCAATATTGAAGCCATCTGAATTGGCATCTGTGACATGTTTGGAGCTGGCTGAAGTATGCAGAGAAGTAAACCTTCCACCAGGGGTATTAAATGTTGTTACTGGATTAGGCAATGATGCTGGTGCTCCTTTGGCATCTCATCCTGATGTAGACAAGGTTGCCTTTACTGGAAGCTCTTTAACTGGGAGCAAGATTATGTCAGCTGCAGCACAGCTAACCAAGCCTGTTTCTCTAGAGCTTGGTGGAAAAAGCCCAATCGTTGTTTTTGAGGATGTTGACCTTGACAAGACTGCTGAATGGACAATCTTTGGCTGCTTCTTTACAAATGGTCAGATTTGCAGTGCAACATCTCGCCTTATTGTGCATGAAAGTATAGCAACAGAATTTGTGGATAAACTTGTGAAATGGGCCAAAAACATCAAAATTTCAGATCCCTTGGAAGAAGGCTGCAGGCTAGGCCCTATTGTTAGTGAAGGACAGTACAAAAAGGTATTGAATTTCATCTCAACCGCTAAGAGTGAAGGTGCAACAATTTTGACAGGAGGGTCTCGTCCAGAGCATTTGAAAAGGGGATACTTTGTTGAACCCACCATCATCAGTGATGTGACTACCTCAATGCAAATTTGGAGAGAAGAAGTTTTTGGACCTGTACTCTCTGTGAAAACATTTAGTACCGAGGAAGAAGCTATTGAACTAGCAAATGACACCCAATACGGCTTAGGGTCTGCCGTAATGTCAAAAGATCTAGAAAGATGTGAGCGTATATCTCAGGCTATTAAAGCTGGAATTGTATGGATAAATTGTGCTCAACCAAGCTTCATTCAAGCCCCATGGGGAGGCATAAAACGAAGTGGCTTTGGTCGTGAATTAGGAGAATGGGGTCTAGAAAACTATTTAAGTGTGAAGCAAGTGACCAAGTACATATCTGATGAGCAGTGGGGCTGGTATCAGCCTCCTTCAAAGCTCTGA 1512 0.4418 MAISVPSRQLFIDGEWKVPVHNNRIPIINPATEDIIGDIPAGTKEDIDLAVDAAKRALSRNKGRDWSSASASVRAGYLRAIASKITEKKDELGKLEAIDSGKPLDEALADLDDVIACFNYYAELAEGLDAKQKAPVSLPMETFKSYILKEPIGVVALITPWNYPLLMATWKVAPALAAGCAAILKPSELASVTCLELAEVCREVNLPPGVLNVVTGLGNDAGAPLASHPDVDKVAFTGSSLTGSKIMSAAAQLTKPVSLELGGKSPIVVFEDVDLDKTAEWTIFGCFFTNGQICSATSRLIVHESIATEFVDKLVKWAKNIKISDPLEEGCRLGPIVSEGQYKKVLNFISTAKSEGATILTGGSRPEHLKRGYFVEPTIISDVTTSMQIWREEVFGPVLSVKTFSTEEEAIELANDTQYGLGSAVMSKDLERCERISQAIKAGIVWINCAQPSFIQAPWGGIKRSGFGRELGEWGLENYLSVKQVTKYISDEQWGWYQPPSKL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0842 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 287 298 IPR016160 GO:0016491
Vra4g0842 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 483 IPR016162 GO:0016491
Vra4g0842 503 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 503 - -
Vra4g0842 503 Pfam Aldehyde dehydrogenase family 22 485 IPR015590 GO:0016491
Vra4g0842 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 458 IPR016163 GO:0016620
Vra4g0842 503 SUPERFAMILY ALDH-like 5 486 IPR016161 GO:0016491
Vra4g0842 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 259 266 IPR029510 GO:0016491
Vra4g0842 503 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 1 503 - -
Vra4g0842 503 CDD ALDH_F10_BADH 27 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0842 Vra-Chr4 15446751 15450959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0842 1 503 Aldehyde Dehydrogenase Gene Family AT3G48170 75.149 0.0 824