Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0836 ATGTCAGCTTCCAGTCATGCAATTGCAGAGGCTGTGGTTGCCACAGCTGGGGCCATGCTACTTATTGCTGCTGTTTTTGTTTACTTCTTTCACAAATTTGTGATTTCTAGATACCGCCAGAGAAACAAAATTGGAGCAAGTTTGCTTCGAGAATCTGGAGTGAACCTTGAGTATATAAACAAAGTTGGTGGCAATGTGAAGGGATTAATCGTTGAAGAAAATGGAGTTGATGTTCTTTATGTGGTGGAGACAGAAAGAAGACCATTGATAACTGGATTCCAAAATAGTATACTCAATCCGAGTTTCGAACACGATGAAGATGAAAAGAGAATAGATATAATGGTCCAAAGGTCCAAACTCTTCAAGCCTGAAATTCCACACCCATGTCAATCTCCAAGCTTGGTTGTTCATGAGAATCATCAAGTACTTAAACCAGAATCACAAACACCATCAGTTTCAACATCACTAACATCAACACAAAACCTCCCACAATCACCTCAGCCAGCACCTCCTACCCAACCACCACCACCACCACCGTCTTCACCAATTATTCTTGAGAACAAGAAAACTCAACCACCACCTCCTCCTCCTCCTCCAACTCGTCCTCCACCACCACCTCCAGGTCCACCTCCTCTTCCAAAGGCCAGTGGCTTCATTTCGTCACTGAAACACCCACCTGCACCCAAAGGGAAAACAAACATAAGAAGCACCAAAGAGGGTTTGGCAGGGGAGAGTTCAAGAGAGAAGGTTGTTGGCCAAACAAGGCTGAAGCCTCTACACTGGGATAAGGTTGTAGCAAATGTTGATCATTCAACGGTGTGGGATCAGATCAATGATGGCTCTTTCAGGTTTGATGATGAACTGATGGAGTCACTCTTTGGGTATTCAAGTAGCTATAAAACACAAGAAAAAAACAGAATTCTTTCCACTTTGGCCAAGTCCAATTCCAATGCACCAACTCAAATATTCATTCTTGACCCAAGAAAATCTCAAAACACTGCCATTGTGCTAAGATCACTTGCCATTTCTCGCAAGGGAATCTTGGATGCTGTTCTTGATGGTCAAGGTCTGAGTGTTGAGACGCTTGAAAGACTCACTAAAATAGCTCCCACCCAAGAAGAGGAAGCTAAAATCATCCAATTCAGTGGCAACCCGGATCAGCTTGCTGATGCCGAGTCTTTCCTGCACTACATTCTTAAAGCGGTTCCAACAGCATTCAACCGTTTGAAAGCGATGCTTTTCAGGTCGAGTTATGATTGTGAAGTTCTTCAGCTCAAGGAACAACTACAAGCGCTTGAAATGGGTTGCAAGGAACTGAGAACTAGTGGTCTGTTTTTGAAACTCCTTGAGGCCATTCTCAAGGCTGGGAATCGAATGAATGCTGGAACTTCAAGAGGCAATGCACAAGGTTTCAACCTGAGTGCTCTTAGAAAACTTTCTGACGTGAAAAGCACAGATGGGAAGACCAGTTTGCTTCATTTTATAGTAGAACAAGTGGTTCAGTCAGAAGGAAAAAGACAAGCTCTCTATCGCAAGCACAAACTTCACACAAGCAATGTTGAAGCAAACAATGTGAATAGAGCTTATTCATATAGACTGATACAACAAGAGGAAGATAAAGAACACGCAATGCTTGGTTTGCAAGTGTTACGTGGGCTAAGTGATGAATTATCTGAAGCAAAGAAAGCAGCTAGTATTGAGTATCACAATTTTATCACAATGTGTTCCACTCTGAATGCTCATGTTACTGAAATTAGACAGATTGTAACGTGCTGTGGCTACACCAGGAGTGGTGGATTTATCAACGAAATGAAAGGGTTCTTGGAGGAATGTGAGGGAGAACTTGAGGTGGTGAAAGAGGAGCAGACAAGGATCATGGAGCTTGTGAAGAAAACAAACGATTACTATCTAGCAGGAGCATCCAAAGACAACATGGTAAACCCCTTTCAACTGTTTGTTATTGTAAAGAATTTTGTTGACATGGTTGATCAGGCTTGCATAGAATTAAAAAGGAAGTTGGAAAAGAAGAATGTGGGAGGAGAAGCTGTGTCAACAACACCACCTTTGTCACCATCAAAGAGGGCACCACTGAGATTCCCTAACTTTGATTTGTATTTTCTGTCAAATGTGTCAGAAACTTCATCTTCTAGCCAGTCAGAAGATGATTTCTGA 2172 0.4231 MSASSHAIAEAVVATAGAMLLIAAVFVYFFHKFVISRYRQRNKIGASLLRESGVNLEYINKVGGNVKGLIVEENGVDVLYVVETERRPLITGFQNSILNPSFEHDEDEKRIDIMVQRSKLFKPEIPHPCQSPSLVVHENHQVLKPESQTPSVSTSLTSTQNLPQSPQPAPPTQPPPPPPSSPIILENKKTQPPPPPPPPTRPPPPPPGPPPLPKASGFISSLKHPPAPKGKTNIRSTKEGLAGESSREKVVGQTRLKPLHWDKVVANVDHSTVWDQINDGSFRFDDELMESLFGYSSSYKTQEKNRILSTLAKSNSNAPTQIFILDPRKSQNTAIVLRSLAISRKGILDAVLDGQGLSVETLERLTKIAPTQEEEAKIIQFSGNPDQLADAESFLHYILKAVPTAFNRLKAMLFRSSYDCEVLQLKEQLQALEMGCKELRTSGLFLKLLEAILKAGNRMNAGTSRGNAQGFNLSALRKLSDVKSTDGKTSLLHFIVEQVVQSEGKRQALYRKHKLHTSNVEANNVNRAYSYRLIQQEEDKEHAMLGLQVLRGLSDELSEAKKAASIEYHNFITMCSTLNAHVTEIRQIVTCCGYTRSGGFINEMKGFLEECEGELEVVKEEQTRIMELVKKTNDYYLAGASKDNMVNPFQLFVIVKNFVDMVDQACIELKRKLEKKNVGGEAVSTTPPLSPSKRAPLRFPNFDLYFLSNVSETSSSSQSEDDF* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0836 723 MobiDBLite consensus disorder prediction 143 163 - -
Vra4g0836 723 PANTHER FORMIN-RELATED 2 718 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vra4g0836 723 ProSiteProfiles Formin homology-2 (FH2) domain profile. 246 688 IPR015425 -
Vra4g0836 723 Coils Coil 422 442 - -
Vra4g0836 723 Coils Coil 601 621 - -
Vra4g0836 723 SMART it6_source 246 677 IPR015425 -
Vra4g0836 723 Pfam Formin Homology 2 Domain 252 662 IPR015425 -
Vra4g0836 723 MobiDBLite consensus disorder prediction 164 214 - -
Vra4g0836 723 MobiDBLite consensus disorder prediction 143 249 - -
Vra4g0836 723 Gene3D Formin, FH2 domain 268 681 IPR042201 -
Vra4g0836 723 PANTHER FORMIN-LIKE PROTEIN 2 718 - -
Vra4g0836 723 SUPERFAMILY Formin homology 2 domain (FH2 domain) 194 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0836 Vra-Chr4 15347282 15350005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0836 8 721 FH2 protein (formin) Gene Family AT1G70140 38.836 3.31e-156 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0836 - - gsj:114409782 1142.1