Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0823 ATGGAGTTTGCGAACTTCAAACTCTACCTTAACTCGAAGTGGGTATCGACGGTGGCGAGCATATGGATTCAGTGCACCAGCGGCTCACTCTATACTTTCTCCATCTACTCCCAAACTCTCAAGTCCACTCAGCTCTACGATCAGTCAACGCTCGACCTTGTCTCCGTCTTCAAGGACATCGGAGTCAACGCTGGCGTCCTCTCCGGCCTCCTCTACGACTTCCTTGCCCGCACAACCACAACCGGGCCCTGGATCGTCCACTTCTTAGGCTCGGCCCAGTGCTTCTTGGGCTATTTCCTCATGTGGGCTGCCGTCGCCGGCCTCTTTCCGCCTGTACCCGTCCCCGTCATGTGCTTCTTCATGTTGCTGACAGCCCACGGGCAGAGTTTCTTCAACACCTCCAACGTTGTCACCGGCGTTCATAATTTCCCTCAGAACAGCGGCACCATTGTCGGCATTTTGAAGGGATTTCTTGGTCTAAGTGGAGCAATATTAATTCAAGTGTACAAAACATTATTCAACAACAATCCTATGTCATATCTTCTGATGCTAGCACTCTTGCCACCTATAAATACTTTGCTGCTTATGTGGTTTGTGAGAATCCACAACACTCGTGAGGATGAAGAAAGGAAGTATTTGAATATATTTTCTGTGATGGCTATGGTTGTTGCTGCATACCTTATGTTTGTTATAATTCTAGATAACATCTTTAGCCTGCAATCATCGGTGCGCATCTTTATACTTGTTGTTCTTGTGTTGTTGCTTGCCTCACTTCTCTTCATTGCATTTAAAGCACATGAAAAGTGCTCTGGTGAAAGAAGTTTAGAAAATTTTCTGGATGAAAGGGCACAACTAATTGTGGAGCCTGAAAAGGTGGATGCAAGGCCGGATTCTTTGAACAATCAAATGACTAGTTTGCAACTAGGAGAAAACCTGAATCTTTTCCAAGCACTGAAAACTTTGAACTTTTGGATTTTGTTTGTTTCTGTTGCTTGTGGTATGGGATCAGGAGCTGCAACTGTTAATAATTTGGGCCAAATAGGGGAATCTCTTGGTTACACAAGCCATGAGACAGGTTCCTTGGTTTCTTTGTGGAGCATTTGGAATTTTCTTGGTCGATTTGGAGCAGGTTATGTGTCAGATTATTATTTGCACACAAGAGGATGGGCAAGACCTATATTCATGGTGATCACTTTAATGGTGATGAGCATTGGTCATGTGGTGATTGTTTCTGGACTTCCAGGTGCCCTATATGCTGGTTCAGCATTGGTGGGTATTTGTTATGGTTCTCAGTGGTCACTAATGTCCACTCTCACTCCTGATATATTTGGTGTTGCAAATATGGGCAGCATATTCAACACCATTAGTATAGCAAGTCCTGTGGGTTCTTATGTATTCTCTGTCAGAGTAGTTGGATATGTATATGACAGAGAAGCATCTGAAGGAAACACATGCATTGGAACTTCTTGTTTTATGTTTTCATTTCTCATAATGGCATCTGCCACTATTCTGGGTTCTCTAACAGCATTACTTTTGTTTTTTCGGACCAAAGATTTCTATGGTCAGGTTATACTCAGAAGAATTCAAAATATTCAGTGA 1599 0.4334 MEFANFKLYLNSKWVSTVASIWIQCTSGSLYTFSIYSQTLKSTQLYDQSTLDLVSVFKDIGVNAGVLSGLLYDFLARTTTTGPWIVHFLGSAQCFLGYFLMWAAVAGLFPPVPVPVMCFFMLLTAHGQSFFNTSNVVTGVHNFPQNSGTIVGILKGFLGLSGAILIQVYKTLFNNNPMSYLLMLALLPPINTLLLMWFVRIHNTREDEERKYLNIFSVMAMVVAAYLMFVIILDNIFSLQSSVRIFILVVLVLLLASLLFIAFKAHEKCSGERSLENFLDERAQLIVEPEKVDARPDSLNNQMTSLQLGENLNLFQALKTLNFWILFVSVACGMGSGAATVNNLGQIGESLGYTSHETGSLVSLWSIWNFLGRFGAGYVSDYYLHTRGWARPIFMVITLMVMSIGHVVIVSGLPGALYAGSALVGICYGSQWSLMSTLTPDIFGVANMGSIFNTISIASPVGSYVFSVRVVGYVYDREASEGNTCIGTSCFMFSFLIMASATILGSLTALLLFFRTKDFYGQVILRRIQNIQ* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0823 532 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 9 530 - -
Vra4g0823 532 CDD MFS_Mch1p_like 12 505 - -
Vra4g0823 532 SUPERFAMILY MFS general substrate transporter 213 518 IPR036259 -
Vra4g0823 532 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 530 - -
Vra4g0823 532 SUPERFAMILY MFS general substrate transporter 10 207 IPR036259 -
Vra4g0823 532 Gene3D MFS general substrate transporter like domains 185 504 IPR036259 -
Vra4g0823 532 Pfam Nodulin-like 13 262 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0823 Vra-Chr4 15178708 15182493 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0823 10 530 Nodulin-like Gene Family AT1G74780 54.409 0.0 570