Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0822 ATGGGGTGGGTGGCGAATCCGTGGACGGCCGTCGCCGCCGCCATCTTGATCCAGTCGAGCTGCGGCGCATCGTACACCTTCAGCATTTACTCCGCCGTGCTGAAGTCAACGCAGGGCTACGACCAATCCACCCTTGATACCGTCTCCGTCTTCAAGGACATCGGTGCTAGCTTCGGCGTCCTATCTGGCCTCCTCTACACCGCCGTCGTTCCCTACACTCATCGCTCTGCCCTCCCTGGCTCGCCGTCCAAGTCCAAATGGACCTCTCTCGCTGGGCCCTGGGTCGTTCTCGCTGCCGGAGCGATCCAGTTCTTCCTGGGCTACCTTTTCATCTGGGCCTCCGTCGTGGGCCTTATAAGCCCGCCCCCGGTGCCCGTCATGAGCTTCTTCGCGTGGCTCGCGGCTAACGGTCAAACCTTCCTGAACACCACCAATGTCGTCACTGGCTTGCGCAATTTCCCTGGGTATAGCGGCACGATCATTGGGATGATGAAGGGCTTTCTCGGACTGAGTGGAGCTATCTTGATCCAAATTTACCATACGTTTTTCGATGGGGAGCCGTCAACGTTCCTTTTGATGCTTGCTTTGTTTCCTTCATTGATCTGCGTGTTGTTTATGTTCTTGTTGAGAATTTATGAAGTTTATGGCACTGATTACAAGAAGCATTTGGATAGTTTCTCTGTGGTTACTGTGATTATTGTTTCCTATCTCGTCTTCATTATAATCTTACAGAACTTGGTCCGTTTGCCATATTGGGGATGGATGTTAGAGTTTGTGATTCTCATGGTTCTGCTAGCATCGCCTTTTGGAATTGCTTTCAAGGCCCACTGGGAGGAGTCGCAGAAGTTTTCACAGTCCTACAGCATTGAGAGGGGTTCTTCTACAATTAAGGGTACTACATCTTCCAGTTATTCTGCATCAGGGGATCAAGTGGAGTACCATGAGTTGCCCAGTGATGAGGGGCAGGCACAAGTGAGTTCAGATGAGAAATTGGCACATGAAGAAGAAGATAAGAGCCCATTGCAAGCTATATGCACGCTTGAGTTTTGGATGTTGTTTGTGATCATGATATCTGGATTAGGCTCTGGGCTTGCAACTATCAATAATATGAACCAAATAGGACAATCCCTTGGGTATAGTACAATGGAGATTACTAATATGGTATCACTATGGAGTATGTGGAACTTTCTAGGTCGTTTTGGAGGTGGCCATATATCTGATTATATCATGCACAGAAAAGGTTGGCCAAGGCCACTGTTGATGACAGCAACACTGGGGATGATGGTTATTGGGCATATAATTATAGCATGTGGTTTCCGTGGAAATTTGTATTTGGGTCCTGTTCTAGTGGGCATTGGCTATGGTGCACATTGGTCCTTGATGCCTACAATCACTTCGGAGATATTTGGTGTGAAGCATATGGGTACCATTTTCAATACCATTGCTGCAGCAAGTCCACTTGGATCTTATATACTTTCTGTGAAAGTTGTTGGGTATATTTATGACAAGCAAGCCGATGAAGATAATTTTTGTTTTGGCACAGGCTGTTTCATGTCTTCATATTTTATCCTGGCAGGCGTCACTTTTCTTACACTTTTGGTTGCTTTGGTATTATACTTCCGGACCCAAAGGTTTTATAAACAAGTTGTGCTTAGAAGATTGAAACATTATGCAAGATGA 1680 0.4679 MGWVANPWTAVAAAILIQSSCGASYTFSIYSAVLKSTQGYDQSTLDTVSVFKDIGASFGVLSGLLYTAVVPYTHRSALPGSPSKSKWTSLAGPWVVLAAGAIQFFLGYLFIWASVVGLISPPPVPVMSFFAWLAANGQTFLNTTNVVTGLRNFPGYSGTIIGMMKGFLGLSGAILIQIYHTFFDGEPSTFLLMLALFPSLICVLFMFLLRIYEVYGTDYKKHLDSFSVVTVIIVSYLVFIIILQNLVRLPYWGWMLEFVILMVLLASPFGIAFKAHWEESQKFSQSYSIERGSSTIKGTTSSSYSASGDQVEYHELPSDEGQAQVSSDEKLAHEEEDKSPLQAICTLEFWMLFVIMISGLGSGLATINNMNQIGQSLGYSTMEITNMVSLWSMWNFLGRFGGGHISDYIMHRKGWPRPLLMTATLGMMVIGHIIIACGFRGNLYLGPVLVGIGYGAHWSLMPTITSEIFGVKHMGTIFNTIAAASPLGSYILSVKVVGYIYDKQADEDNFCFGTGCFMSSYFILAGVTFLTLLVALVLYFRTQRFYKQVVLRRLKHYAR* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0822 559 ProSiteProfiles Major facilitator superfamily (MFS) profile. 347 559 IPR020846 GO:0022857
Vra4g0822 559 CDD MFS_Mch1p_like 7 530 - -
Vra4g0822 559 SUPERFAMILY MFS general substrate transporter 233 544 IPR036259 -
Vra4g0822 559 Pfam Major Facilitator Superfamily 352 544 IPR011701 GO:0022857|GO:0055085
Vra4g0822 559 Pfam Nodulin-like 92 272 IPR010658 -
Vra4g0822 559 Pfam Nodulin-like 7 68 IPR010658 -
Vra4g0822 559 PANTHER F25A4.25 PROTEIN 6 557 - -
Vra4g0822 559 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 6 557 - -
Vra4g0822 559 Gene3D MFS general substrate transporter like domains 343 548 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0822 Vra-Chr4 15157042 15159459 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0822 1 556 Nodulin-like Gene Family AT1G74780 53.943 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0822 - - gmx:100775628 931.784